RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 RAB1CQ92928 201 aa8.65□□□□□ -1.02
VPS11-207ENST00000620429 METTL7AQ9H8H3 244 aa8.65□□□□□ -1.02
VPS11-207ENST00000620429 TNFRSF18Q9Y5U5 241 aa8.65□□□□□ -1.02
VPS11-207ENST00000620429 GVINP1Q7Z2Y8 2422 aa8.65□□□□□ -1.02
VPS11-207ENST00000620429 LY6G6EA0A0G2JKS1 128 aa8.65□□□□□ -1.03
VPS11-207ENST00000620429 NPIPA3F8WFD2 350 aa8.65□□□□□ -1.03
VPS11-207ENST00000620429 BRI3O95415 125 aa8.65□□□□□ -1.03
VPS11-207ENST00000620429 CCL7P80098 99 aa8.65□□□□□ -1.03
VPS11-207ENST00000620429 TMEM191AQ9H0A3 160 aa8.65□□□□□ -1.03
VPS11-207ENST00000620429 AKIRIN1Q9H9L7 192 aaPredicted RBP8.65□□□□□ -1.03
VPS11-207ENST00000620429 TRAPPC2LQ9UL33 140 aa8.65□□□□□ -1.03
VPS11-207ENST00000620429 U3KQA8 63 aa8.65□□□□□ -1.03
VPS11-207ENST00000620429 CACNA1EQ15878 2313 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 TM4SF5O14894 197 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 APCSP02743 223 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 CLEC3BP05452 202 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 IAPPP10997 89 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 OTX2P32243 289 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 GNG4P50150 75 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 PMP22Q01453 160 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 GAPTQ8N292 157 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 KIR3DL3Q8N743 410 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 WDR54Q9H977 334 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 ARHGAP21Q5T5U3 1957 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 IGKV1-27A0A075B6S5 117 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 COX8AP10176 69 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 SLC25A53Q5H9E4 307 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 TMEM14EPQ6UXP3 125 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 BPIFA4PQ86YQ2 179 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 TMEM45BQ96B21 275 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 BORCS8Q96FH0 119 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 GPHA2Q96T91 129 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 OR2D2Q9H210 308 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 ZNF292O60281 2723 aa8.64□□□□□ -1.03
VPS11-207ENST00000620429 KMT2BQ9UMN6 2715 aaPredicted RBP8.63□□□□□ -1.03
VPS11-207ENST00000620429 TNFRSF13BO14836 293 aaPredicted RBP8.63□□□□□ -1.03
VPS11-207ENST00000620429 PLA2G2CQ5R387 149 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 LYSMD4Q5XG99 296 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 TMEM211Q6ICI0 200 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 SPTSSAQ969W0 71 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 GPR82Q96P67 336 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 ZNF442Q9H7R0 627 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 TNFRSF19Q9NS68 423 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 HIF1ANQ9NWT6 349 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 SELENOKQ9Y6D0 94 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 TRAV38-1A0A0B4J264 116 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 MALLQ13021 153 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 FAM120AOSQ5T036 256 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 SPATA31B1PQ5VZV4 182 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 Q6ZRM9 215 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 ANKRD37Q7Z713 158 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 OSR2Q8N2R0 312 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 TMEM147Q9BVK8 224 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 ZNF257Q9Y2Q1 563 aa8.63□□□□□ -1.03
VPS11-207ENST00000620429 IGKV1-12A0A0C4DH73 117 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 IGKV1D-12P01611 117 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 HBZP02008 142 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 IGFBP2P18065 325 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 RHBDD2Q6NTF9 364 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 RASL11AQ6T310 242 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 Q6ZPA2 131 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 GALMQ96C23 342 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 C5orf30Q96GV9 206 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 MS4A5Q9H3V2 200 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 SAP30LQ9HAJ7 183 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 ERRFI1Q9UJM3 462 aaPredicted RBP8.62□□□□□ -1.03
VPS11-207ENST00000620429 ZNF391Q9UJN7 358 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 FREM2Q5SZK8 3169 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 ADAMTS20P59510 1910 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 PTPRZ1P23471 2315 aaPredicted RBP8.62□□□□□ -1.03
VPS11-207ENST00000620429 IGHV5-10-1A0A0J9YXX1 117 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 ZNF816-ZNF321PA0A0X1KG74 233 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 SCO2A0A1W2PP80 73 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 ZNF716A6NP11 495 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 PATE3B3GLJ2 98 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 ISLRO14498 428 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 SCRG1O75711 98 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 CELA3AP09093 270 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 FABP2P12104 132 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 GATA3P23771 443 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 KIR3DS1Q14943 382 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 SPANXN5Q5MJ07 72 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 Q6ZS49 121 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 Q6ZSR3 168 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 SPACA3Q8IXA5 215 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 NFAM1Q8NET5 270 aaPredicted RBP8.62□□□□□ -1.03
VPS11-207ENST00000620429 OR2T6Q8NHC8 308 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 WIPF2Q8TF74 440 aaPredicted RBP8.62□□□□□ -1.03
VPS11-207ENST00000620429 TMEM204Q9BSN7 226 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 SPANXB1Q9NS25 103 aaPredicted RBP8.62□□□□□ -1.03
VPS11-207ENST00000620429 TECRQ9NZ01 308 aaKnown RBP8.62□□□□□ -1.03
VPS11-207ENST00000620429 PI4KAP42356 2102 aa8.62□□□□□ -1.03
VPS11-207ENST00000620429 IGHV3-15A0A0B4J1V0 119 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 VWC2LB2RUY7 222 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 DHHO43323 396 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 PDCD6O75340 191 aa8.61□□□□□ -1.03
VPS11-207ENST00000620429 OR7C1O76099 320 aaPredicted RBP8.61□□□□□ -1.03
VPS11-207ENST00000620429 F2RP25116 425 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms