RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 AREGP15514 252 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 HIST1H1BP16401 226 aaKnown RBP12.44□□□□□ -0.42
LSM4-206ENST00000600289 PI3P19957 117 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 ZP3P21754 424 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 SLURP1P55000 103 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 OR1L8Q8NGR8 309 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 DCUN1D4Q92564 292 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 DLX4Q92988 240 aaPredicted RBP12.44□□□□□ -0.42
LSM4-206ENST00000600289 FKBP11Q9NYL4 201 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 COPZ2Q9P299 210 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 PRNDQ9UKY0 176 aa12.44□□□□□ -0.42
LSM4-206ENST00000600289 C3orf85A0A1B0GTC6 90 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 TEX50A0A1B0GTY4 177 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 C15orf61A6NNL5 157 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 SNAPC5O75971 98 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 SERPINE2P07093 398 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 UCP1P25874 307 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 HOXD3P31249 432 aaPredicted RBP12.43□□□□□ -0.42
LSM4-206ENST00000600289 KRTAP10-11P60412 298 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 Q8N402 240 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 GDPD1Q8N9F7 314 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 OR51S1Q8NGJ8 323 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 OR5B3Q8NH48 314 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 FANCD2OSQ96PS1 177 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 TP53RKQ96S44 253 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 RTBDNQ9BSG5 229 aaPredicted RBP12.43□□□□□ -0.42
LSM4-206ENST00000600289 NDUFA4L2Q9NRX3 87 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 TMEM14BQ9NUH8 114 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 PEF1Q9UBV8 284 aaKnown RBP12.43□□□□□ -0.42
LSM4-206ENST00000600289 SCP2D1Q9UJQ7 156 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
LSM4-206ENST00000600289 IGLV11-55A0A075B6I3 123 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.42□□□□□ -0.42
LSM4-206ENST00000600289 ATG12O94817 140 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 PRH1P02810 166 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 P0C879 139 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 AP3S2P59780 193 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 ATP5G2Q06055 141 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 EXOSC2Q13868 293 aaKnown RBP12.42□□□□□ -0.42
LSM4-206ENST00000600289 KLF9Q13886 244 aaPredicted RBP12.42□□□□□ -0.42
LSM4-206ENST00000600289 PYDC2Q56P42 97 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 SPANXN2Q5MJ10 180 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 ACSM6Q6P461 480 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 OR6Q1Q8NGQ2 317 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 LSM10Q969L4 123 aaKnown RBP12.42□□□□□ -0.42
LSM4-206ENST00000600289 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 C14orf166Q9Y224 244 aaKnown RBP12.42□□□□□ -0.42
LSM4-206ENST00000600289 OR51B2Q9Y5P1 312 aa12.42□□□□□ -0.42
LSM4-206ENST00000600289 FAUP35544 74 aaKnown RBP12.41□□□□□ -0.42
LSM4-206ENST00000600289 DEFA5Q01523 94 aa12.41□□□□□ -0.42
LSM4-206ENST00000600289 C15orf32Q32M92 178 aa12.41□□□□□ -0.42
LSM4-206ENST00000600289 H2BFWTQ7Z2G1 175 aa12.41□□□□□ -0.42
LSM4-206ENST00000600289 ZNF429Q86V71 674 aa12.41□□□□□ -0.42
LSM4-206ENST00000600289 SCGB3A2Q96PL1 93 aa12.41□□□□□ -0.42
LSM4-206ENST00000600289 OR2J3O76001 311 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 IGKV1-5P01602 117 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 WT1-ASQ06250 92 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 KLF5Q13887 457 aaPredicted RBP12.4□□□□□ -0.42
LSM4-206ENST00000600289 C19orf35Q6ZS72 473 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 TMEM56Q96MV1 263 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 SRRQ9GZT4 340 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 TMEM222Q9H0R3 208 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 NAA60Q9H7X0 242 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 FBXL7Q9UJT9 491 aa12.4□□□□□ -0.42
LSM4-206ENST00000600289 ANKRD34BA5PLL1 514 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 CRYM-AS1A6NIL9 109 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 DBX1A6NMT0 343 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 CYB5BO43169 146 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 CDS2O95674 445 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 TRBV12-3P01733 135 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 REG1AP05451 166 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 DEFA4P12838 97 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 DHODHQ02127 395 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 TOMM5Q8N4H5 51 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 OR10W1Q8NGF6 305 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 OR4A16Q8NH70 328 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 THYN1Q9P016 225 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 NSG2Q9Y328 171 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 DMRT1Q9Y5R6 373 aa12.39□□□□□ -0.43
LSM4-206ENST00000600289 TEX13DA0A0J9YY54 714 aaPredicted RBP12.38□□□□□ -0.43
LSM4-206ENST00000600289 K7EIL1 84 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 BMPR1BO00238 502 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 NDUFB8O95169 186 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 PRCDQ00LT1 54 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 OR1L6Q8NGR2 347 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 GLYATL2Q8WU03 294 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 EEF1AKMT3Q96AZ1 226 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 GALNT14Q96FL9 552 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 CXorf58Q96LI9 332 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 ELOVL1Q9BW60 279 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 MCUBQ9NWR8 336 aa12.38□□□□□ -0.43
LSM4-206ENST00000600289 F11RQ9Y624 299 aaKnown RBP12.38□□□□□ -0.43
LSM4-206ENST00000600289 TRBV7-1A0A0A6YYK4 115 aa12.37□□□□□ -0.43
LSM4-206ENST00000600289 WI2-2373I1.2A0A1W2PRP0 233 aa12.37□□□□□ -0.43
LSM4-206ENST00000600289 INS-IGF2F8WCM5 200 aa12.37□□□□□ -0.43
LSM4-206ENST00000600289 SAP30O75446 220 aa12.37□□□□□ -0.43
LSM4-206ENST00000600289 OR5AC1P0C628 307 aa12.37□□□□□ -0.43
LSM4-206ENST00000600289 OR13C7P0DN81 318 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms