RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SECTM1Q8WVN6 248 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 HRASLSQ9HDD0 168 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 CCL28Q9NRJ3 127 aa13.06□□□□□ -0.32
SSBP4-207ENST00000600244 RBM7Q9Y580 266 aaKnown RBP13.06□□□□□ -0.32
SSBP4-207ENST00000600244 LINC00205P59089 165 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 FXYD4P59646 89 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 HERV-K104P61576 105 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 TMEM17Q86X19 198 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 MAPKAPK5-AS1Q8N8E1 139 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 ZNF383Q8NA42 475 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 ZBTB34Q8NCN2 500 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 BVESQ8NE79 360 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 OR5AN1Q8NGI8 311 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 OR13C8Q8NGS7 320 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 TERB2Q8NHR7 220 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 SLC5A7Q9GZV3 580 aa13.05□□□□□ -0.32
SSBP4-207ENST00000600244 DISC1C4P0D8 188 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 M0R1X1 148 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 UBE2CO00762 179 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 IFNA4P05014 189 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 EDN2P20800 178 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 DUTP33316 252 aaKnown RBP13.04□□□□□ -0.32
SSBP4-207ENST00000600244 NANOS2P60321 138 aaKnown RBP13.04□□□□□ -0.32
SSBP4-207ENST00000600244 TRIQKQ629K1 86 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 ZNF818PQ6ZRF7 136 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 DRAXINQ8NBI3 349 aaPredicted RBP13.04□□□□□ -0.32
SSBP4-207ENST00000600244 CLCC1Q96S66 551 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 PRRT1Q99946 306 aa13.04□□□□□ -0.32
SSBP4-207ENST00000600244 TECRQ9NZ01 308 aaKnown RBP13.04□□□□□ -0.32
SSBP4-207ENST00000600244 H0YJW9 148 aa13.03□□□□□ -0.32
SSBP4-207ENST00000600244 PLA2G10O15496 165 aa13.03□□□□□ -0.32
SSBP4-207ENST00000600244 CDK2AP2O75956 126 aa13.03□□□□□ -0.32
SSBP4-207ENST00000600244 FAUP35544 74 aaKnown RBP13.03□□□□□ -0.32
SSBP4-207ENST00000600244 DEFA5Q01523 94 aa13.03□□□□□ -0.32
SSBP4-207ENST00000600244 ZNF57Q68EA5 555 aaPredicted RBP13.03□□□□□ -0.32
SSBP4-207ENST00000600244 OR51S1Q8NGJ8 323 aa13.03□□□□□ -0.32
SSBP4-207ENST00000600244 DMBT1Q9UGM3 2413 aaPredicted RBP13.02□□□□□ -0.32
SSBP4-207ENST00000600244 C2orf70A6NJV1 201 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 LINC00473A8K010 186 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 BMPR1BO00238 502 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 RBMXL2O75526 392 aaKnown RBP13.02□□□□□ -0.33
SSBP4-207ENST00000600244 CA2P00918 260 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 FOLR2P14207 255 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 MC5RP33032 325 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 APOC4P55056 127 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 RPL30P62888 115 aaKnown RBP13.02□□□□□ -0.33
SSBP4-207ENST00000600244 IFITM3Q01628 133 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 RBMS2Q15434 407 aaKnown RBP13.02□□□□□ -0.33
SSBP4-207ENST00000600244 LPCAT3Q6P1A2 487 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 GLDNQ6ZMI3 551 aaPredicted RBP13.02□□□□□ -0.33
SSBP4-207ENST00000600244 ZNF66Q6ZN08 573 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 OR52B4Q8NGK2 314 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 BORCS5Q969J3 196 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 ADTRPQ96IZ2 230 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 HSD17B10Q99714 261 aaKnown RBP13.02□□□□□ -0.33
SSBP4-207ENST00000600244 C7orf50Q9BRJ6 194 aaKnown RBP13.02□□□□□ -0.33
SSBP4-207ENST00000600244 MFFQ9GZY8 342 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 FBXL7Q9UJT9 491 aa13.02□□□□□ -0.33
SSBP4-207ENST00000600244 LRP1BQ9NZR2 4599 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 GPR31O00270 319 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 UPK1BO75841 260 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 CTRB1P17538 263 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 BTCP35070 178 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 BRWD1-AS2P59051 145 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 TAGLNQ01995 201 aaKnown RBP13.01□□□□□ -0.33
SSBP4-207ENST00000600244 SURF2Q15527 256 aaPredicted RBP13.01□□□□□ -0.33
SSBP4-207ENST00000600244 SCGB2B2Q4G0G5 96 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 CTRB2Q6GPI1 263 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 IDO2Q6ZQW0 420 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 SLC38A6Q8IZM9 456 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 GPHA2Q96T91 129 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 FBXL17Q9UF56 701 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 SCP2D1Q9UJQ7 156 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 GPR132Q9UNW8 380 aa13.01□□□□□ -0.33
SSBP4-207ENST00000600244 PGLYRP1O75594 196 aaPredicted RBP13□□□□□ -0.33
SSBP4-207ENST00000600244 INPP1P49441 399 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 RND3P61587 244 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 SSBP2P81877 361 aaPredicted RBP13□□□□□ -0.33
SSBP4-207ENST00000600244 FXYD3Q14802 87 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 PSG5Q15238 335 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 PDPNQ86YL7 162 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 TMEM61Q8N0U2 210 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 Q8N1X5 172 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 GRPEL2Q8TAA5 225 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 C11orf45Q8TAV5 145 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 MARCH1Q8TCQ1 289 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 ZNF486Q96H40 463 aaPredicted RBP13□□□□□ -0.33
SSBP4-207ENST00000600244 MCUBQ9NWR8 336 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 METTL1Q9UBP6 276 aaKnown RBP13□□□□□ -0.33
SSBP4-207ENST00000600244 TBC1D24Q9ULP9 559 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 WASHC3Q9Y3C0 194 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 UBR4Q5T4S7 5183 aa13□□□□□ -0.33
SSBP4-207ENST00000600244 APOBP04114 4563 aaKnown RBP12.99□□□□□ -0.33
SSBP4-207ENST00000600244 CTSDP07339 412 aaPredicted RBP12.99□□□□□ -0.33
SSBP4-207ENST00000600244 TM4SF20Q53R12 229 aa12.99□□□□□ -0.33
SSBP4-207ENST00000600244 RNF5Q99942 180 aa12.99□□□□□ -0.33
SSBP4-207ENST00000600244 RTBDNQ9BSG5 229 aaPredicted RBP12.99□□□□□ -0.33
SSBP4-207ENST00000600244 C5orf66Q9H5L9 145 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms