RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 RLN1P04808 185 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
IRF3-223ENST00000599223 TEX45Q8NA69 505 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 HIPK2Q9H2X6 1198 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 TUBA4BQ9H853 241 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 SLC2A8Q9NY64 477 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 EHFQ9NZC4 300 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 ANXA10Q9UJ72 324 aa11.09□□□□□ -0.63
IRF3-223ENST00000599223 RBMY1BA6NDE4 496 aaKnown RBP11.08□□□□□ -0.64
IRF3-223ENST00000599223 RBMY1EA6NEQ0 496 aaKnown RBP11.08□□□□□ -0.64
IRF3-223ENST00000599223 PPP5D1E7EU14 171 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 CD7P09564 240 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 RBMY1DP0C7P1 496 aaKnown RBP11.08□□□□□ -0.64
IRF3-223ENST00000599223 TRAPPC2P0DI81 140 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 TRAPPC2BP0DI82 140 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 CD81P60033 236 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 CBX3Q13185 183 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 CDK10Q15131 360 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 OR2B11Q5JQS5 317 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 AKAP14Q86UN6 197 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 CADM3Q8N126 398 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 OR4D10Q8NGI6 311 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 SNAPC3Q92966 411 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 DMRT1Q9Y5R6 373 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 ALG5Q9Y673 324 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
IRF3-223ENST00000599223 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.07□□□□□ -0.64
IRF3-223ENST00000599223 A0A1B0GW64 132 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 FAM223BA6NKX1 122 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 MPPED1O15442 326 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 IGLV2-14P01704 120 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 HLA-AP01891 365 aaKnown RBP11.07□□□□□ -0.64
IRF3-223ENST00000599223 CTXN2P0C2S0 81 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 RRASP10301 218 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 RPL30P62888 115 aaKnown RBP11.07□□□□□ -0.64
IRF3-223ENST00000599223 Q6ZS49 121 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 FAM223AQ8IWN6 122 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 VKORC1L1Q8N0U8 176 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 OR6F1Q8NGZ6 308 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 ADTRPQ96IZ2 230 aa11.07□□□□□ -0.64
IRF3-223ENST00000599223 RBM7Q9Y580 266 aaKnown RBP11.07□□□□□ -0.64
IRF3-223ENST00000599223 IGKV1D-13A0A0B4J2D9 117 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 HMX3A6NHT5 357 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 ZNF785A8K8V0 405 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 TEX22C9J3V5 150 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 SSNA1O43805 119 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 FCGR3BO75015 233 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 OR2J3O76001 311 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 IGKV1-13P0DP09 117 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 C15orf32Q32M92 178 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 TERB2Q8NHR7 220 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 OSR1Q8TAX0 266 aaPredicted RBP11.06□□□□□ -0.64
IRF3-223ENST00000599223 CHAC2Q8WUX2 184 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 GIMAP1Q8WWP7 306 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 CACNG8Q8WXS5 425 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 NEURL2Q9BR09 285 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 MED28Q9H204 178 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 PEMTQ9UBM1 199 aa11.06□□□□□ -0.64
IRF3-223ENST00000599223 C2orf70A6NJV1 201 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 E7EUB6 86 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 CREBL2O60519 120 aaPredicted RBP11.05□□□□□ -0.64
IRF3-223ENST00000599223 IL5P05113 134 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 HNRNPCP07910 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
IRF3-223ENST00000599223 ZNF735P0CB33 412 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 NFYAP23511 347 aaPredicted RBP11.05□□□□□ -0.64
IRF3-223ENST00000599223 TAS2R31P59538 309 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 ATP5G2Q06055 141 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 C4orf46Q504U0 113 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 KCTD9Q7L273 389 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 ZNF645Q8N7E2 425 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 NECAP1Q8NC96 275 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 OR2K2Q8NGT1 345 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 WDR89Q96FK6 387 aaPredicted RBP11.05□□□□□ -0.64
IRF3-223ENST00000599223 CCDC140Q96MF4 163 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 ZC4H2Q9NQZ6 224 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 S4R3C0 116 aa11.05□□□□□ -0.64
IRF3-223ENST00000599223 C7orf66A4D0T2 115 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 CCNKO75909 580 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 IGHV3-23P01764 117 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 PGAM2P15259 253 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 BRWD1-AS2P59051 145 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 HERV-K104P61576 105 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 EIF4EBP1Q13541 118 aaPredicted RBP11.04□□□□□ -0.64
IRF3-223ENST00000599223 SURF2Q15527 256 aaPredicted RBP11.04□□□□□ -0.64
IRF3-223ENST00000599223 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 TMED4Q7Z7H5 227 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 DYNLRB2Q8TF09 96 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 GPHA2Q96T91 129 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 SPIN2AQ99865 258 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 SPIN2BQ9BPZ2 258 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 SRD5A3Q9H8P0 318 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 FLVCR2Q9UPI3 526 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 C14orf166Q9Y224 244 aaKnown RBP11.04□□□□□ -0.64
IRF3-223ENST00000599223 FRAS1Q86XX4 4008 aa11.04□□□□□ -0.64
IRF3-223ENST00000599223 SNRPGP15A8MWD9 76 aa11.03□□□□□ -0.64
IRF3-223ENST00000599223 TUSC2O75896 110 aa11.03□□□□□ -0.64
IRF3-223ENST00000599223 IL6RP08887 468 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms