RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 TMEM222Q9H0R3 208 aa10.48□□□□□ -0.73
SOX2-OT-229ENST00000598474 AKIP1Q9NQ31 210 aa10.48□□□□□ -0.73
SOX2-OT-229ENST00000598474 NDUFA4L2Q9NRX3 87 aa10.48□□□□□ -0.73
SOX2-OT-229ENST00000598474 PRNDQ9UKY0 176 aa10.48□□□□□ -0.73
SOX2-OT-229ENST00000598474 OR51B2Q9Y5P1 312 aa10.48□□□□□ -0.73
SOX2-OT-229ENST00000598474 A0A0G2JLM5 398 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 FAM223BA6NKX1 122 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 OR8U8P0C7N1 319 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 TRAPPC2P0DI81 140 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 TRAPPC2BP0DI82 140 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 IL7P13232 177 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 WT1-ASQ06250 92 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 FAM223AQ8IWN6 122 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 OR1L8Q8NGR8 309 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 USMG5Q96IX5 58 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 SCGB3A2Q96PL1 93 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 FANCD2OSQ96PS1 177 aa10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 SRSF8Q9BRL6 282 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-229ENST00000598474 A0A0G2JRQ6 117 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 LINC01619G3V211 115 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 OR2J3O76001 311 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 CDS2O95674 445 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 HSPB1P04792 205 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 AKR1C4P17516 323 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 AKR1C2P52895 323 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 SLURP1P55000 103 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 SUPT4H1P63272 117 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 DEFA6Q01524 100 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 KLK9Q2XQG4 91 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 THOC7Q6I9Y2 204 aaKnown RBP10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 ZNF343Q6P1L6 599 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 NECAP1Q8NC96 275 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 OR5B3Q8NH48 314 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 DPF1Q92782 380 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 GALNT14Q96FL9 552 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 HINT2Q9BX68 163 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 KLK9Q9UKQ9 250 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 DMRT1Q9Y5R6 373 aa10.46□□□□□ -0.73
SOX2-OT-229ENST00000598474 IGLV11-55A0A075B6I3 123 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 A0A0B4J293 547 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 LINC00854A0A1B0GVQ3 168 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 ANKRD34BA5PLL1 514 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 NDUFB8O95169 186 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 TRBV12-3P01733 135 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 OR13C7P0DN81 318 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 INPP1P49441 399 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 CCR6P51684 374 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 DHODHQ02127 395 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 ATP5G2Q06055 141 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 EXOSC2Q13868 293 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 TMEM187Q14656 261 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 C15orf32Q32M92 178 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 SGPP2Q8IWX5 399 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 SELENOHQ8IZQ5 122 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 OR4A16Q8NH70 328 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 DLX4Q92988 240 aaPredicted RBP10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 LSM10Q969L4 123 aaKnown RBP10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 TMEM56Q96MV1 263 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 SLC25A21Q9BQT8 299 aaPredicted RBP10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 FKBP11Q9NYL4 201 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 PRR13Q9NZ81 148 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 PTTG2Q9NZH5 202 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 FBXL7Q9UJT9 491 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 TMEM56-RWDD3S4R434 201 aa10.45□□□□□ -0.74
SOX2-OT-229ENST00000598474 ATG12O94817 140 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 DHFRP00374 187 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 DEFA4P12838 97 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 BTCP35070 178 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 Q6ZRM9 215 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 LINC00299Q6ZSB3 139 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 HSD17B13Q7Z5P4 300 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 TMED4Q7Z7H5 227 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 ZNF429Q86V71 674 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 DCUN1D4Q92564 292 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 RBPMSQ93062 196 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 MCRIP2Q9BUT9 160 aaKnown RBP10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 RANGRFQ9HD47 186 aaPredicted RBP10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 BATF3Q9NR55 127 aa10.44□□□□□ -0.74
SOX2-OT-229ENST00000598474 NAP1L6A6NFF2 107 aa10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 PRB2P02812 416 aaPredicted RBP10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 MFAP2P55001 183 aa10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 HSPE1P61604 102 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 PRCDQ00LT1 54 aa10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 RBMS2Q15434 407 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 RRNAD1Q96FB5 475 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 PEF1Q9UBV8 284 aaKnown RBP10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 S4R3C0 116 aa10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 TNCP24821 2201 aa10.43□□□□□ -0.74
SOX2-OT-229ENST00000598474 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 MFSD2BA6NFX1 497 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 SEC14L6B5MCN3 397 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 BMPR1BO00238 502 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 OVOL1O14753 267 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 PLA2G10O15496 165 aa10.42□□□□□ -0.74
SOX2-OT-229ENST00000598474 ST8SIA3O43173 380 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms