RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 DEFB114Q30KQ6 69 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 TBC1D26Q86UD7 250 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 GPHB5Q86YW7 130 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 CMTM1Q8IZ96 169 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 WDR89Q96FK6 387 aaPredicted RBP9.84□□□□□ -0.83
LIG1-212ENST00000596549 MIXL1Q9H2W2 232 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 PLEKHA3Q9HB20 300 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 EXTL2Q9UBQ6 330 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 KLK11Q9UBX7 282 aa9.84□□□□□ -0.83
LIG1-212ENST00000596549 TRBV7-1A0A0A6YYK4 115 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 SMIM31A0A1B0GVY4 71 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 C15orf61A6NNL5 157 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 FAM25AB3EWG3 89 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 FAM25CB3EWG5 89 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 FAM25GB3EWG6 89 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 F8W735 103 aaPredicted RBP9.83□□□□□ -0.84
LIG1-212ENST00000596549 SERPINE2P07093 398 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 TRAPPC2P0DI81 140 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 TRAPPC2BP0DI82 140 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 OR13C7P0DN81 318 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 CD81P60033 236 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 TSPAN5P62079 268 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 LHFPL1Q86WI0 220 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 LAX1Q8IWV1 398 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 CADM3Q8N126 398 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 OR52I2Q8NH67 350 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 LSM10Q969L4 123 aaKnown RBP9.83□□□□□ -0.84
LIG1-212ENST00000596549 ZNF414Q96IQ9 312 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 SEC22AQ96IW7 307 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 CXorf58Q96LI9 332 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 MRPS26Q9BYN8 205 aaKnown RBP9.83□□□□□ -0.84
LIG1-212ENST00000596549 ZMAT4Q9H898 229 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 MLXQ9UH92 298 aa9.83□□□□□ -0.84
LIG1-212ENST00000596549 F11RQ9Y624 299 aaKnown RBP9.83□□□□□ -0.84
LIG1-212ENST00000596549 ZNF182P17025 639 aaPredicted RBP9.82□□□□□ -0.84
LIG1-212ENST00000596549 CBLN1P23435 193 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 PTBP1P26599 531 aaKnown RBP eCLIP9.82□□□□□ -0.84
LIG1-212ENST00000596549 UCP3P55916 312 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 SPCS2Q15005 226 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 HAGHQ16775 308 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 MZT2AQ6P582 158 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 LINC00322Q6ZN03 302 aaPredicted RBP9.82□□□□□ -0.84
LIG1-212ENST00000596549 SLC38A6Q8IZM9 456 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 TMEM61Q8N0U2 210 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 OR4D10Q8NGI6 311 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 OR1L8Q8NGR8 309 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 MUC7Q8TAX7 377 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 AP3S1Q92572 193 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 ABHD1Q96SE0 405 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 NEURL2Q9BR09 285 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 EDA2RQ9HAV5 297 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 FAM212BQ9NTI7 297 aaPredicted RBP9.82□□□□□ -0.84
LIG1-212ENST00000596549 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 OR51B2Q9Y5P1 312 aa9.82□□□□□ -0.84
LIG1-212ENST00000596549 DNAH7Q8WXX0 4024 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 IGHV3-21A0A0B4J1V1 117 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 IGHV3-35A0A0C4DH35 117 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 C3orf84H3BNL1 204 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 TGOLN2O43493 480 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 CD3DP04234 171 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 CLEC3BP05452 202 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 TM4SF20Q53R12 229 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 LPCAT3Q6P1A2 487 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 BTNL8Q6UX41 500 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 HSD17B13Q7Z5P4 300 aaPredicted RBP9.81□□□□□ -0.84
LIG1-212ENST00000596549 VN1R17PQ8TDU5 208 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 MRGPRFQ96AM1 343 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 CITED4Q96RK1 184 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 HINT2Q9BX68 163 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 ZNF436Q9C0F3 470 aaPredicted RBP9.81□□□□□ -0.84
LIG1-212ENST00000596549 RETNQ9HD89 108 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
LIG1-212ENST00000596549 MTFP1Q9UDX5 166 aa9.81□□□□□ -0.84
LIG1-212ENST00000596549 ZNF320A2RRD8 509 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 K7EIM0 57 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 SNAPC5O75971 98 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 PI3P19957 117 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 PPP5CP53041 499 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 RND3P61587 244 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 RNASE10Q5GAN6 216 aaKnown RBP9.8□□□□□ -0.84
LIG1-212ENST00000596549 CASC10Q5T4H9 136 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 GPR141Q7Z602 305 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 ARRDC1Q8N5I2 433 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 DEFB125Q8N687 156 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 OR5B3Q8NH48 314 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 TMEM190Q8WZ59 177 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 TP53RKQ96S44 253 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 THYN1Q9P016 225 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 PRNDQ9UKY0 176 aa9.8□□□□□ -0.84
LIG1-212ENST00000596549 OR2T8A6NH00 312 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 CD74P04233 296 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 P0C879 139 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 C8orf88P0DMB2 117 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 ADMP35318 185 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 GUCA2BQ16661 112 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 IZUMO4Q1ZYL8 232 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 FAM106AQ4KMX7 169 aa9.79□□□□□ -0.84
LIG1-212ENST00000596549 ZNF57Q68EA5 555 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms