RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 MYOD1P15172 320 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 CTRB1P17538 263 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 FOXB2Q5VYV0 432 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 CTRB2Q6GPI1 263 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 ZNF343Q6P1L6 599 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 SGPP2Q8IWX5 399 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 TP53RKQ96S44 253 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 HINT2Q9BX68 163 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 C5orf66Q9H5L9 145 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 AKIP1Q9NQ31 210 aa13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 PEF1Q9UBV8 284 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-212ENST00000596163 A0A1B0GW64 132 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 ANKRD34BA5PLL1 514 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 SEC14L6B5MCN3 397 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 OVOL1O14753 267 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 RBMXL2O75526 392 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 OR2J3O76001 311 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 IGKV1-39P01597 117 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 IGKV1D-39P04432 117 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 AREGP15514 252 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 UCP1P25874 307 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 AKR1C2P52895 323 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 ZNF45Q02386 682 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 TATDN3Q17R31 274 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 DCUN1D4Q92564 292 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 RRNAD1Q96FB5 475 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 SRRQ9GZT4 340 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 NDUFA4L2Q9NRX3 87 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 THYN1Q9P016 225 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 FBXL7Q9UJT9 491 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
SHKBP1-212ENST00000596163 TNCP24821 2201 aa13.33□□□□□ -0.27
SHKBP1-212ENST00000596163 NOTCH3Q9UM47 2321 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 CGB1A6NKQ9 187 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 INSL3P51460 131 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 EXOSC2Q13868 293 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 KLK9Q2XQG4 91 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 SP6Q3SY56 376 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 OR1L6Q8NGR2 347 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 TMEM222Q9H0R3 208 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 TMEM14BQ9NUH8 114 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 KLK9Q9UKQ9 250 aa13.33□□□□□ -0.28
SHKBP1-212ENST00000596163 CRYM-AS1A6NIL9 109 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 REG1AP05451 166 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 OR5AC1P0C628 307 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 OR13C7P0DN81 318 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 MECP2P51608 486 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 SLURP1P55000 103 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 C15orf32Q32M92 178 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 DLX4Q92988 240 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 SLC25A21Q9BQT8 299 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 ELOVL1Q9BW60 279 aa13.32□□□□□ -0.28
SHKBP1-212ENST00000596163 NOTCH1P46531 2555 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 PIGBOS1A0A0B4J2F0 54 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 NAP1L6A6NFF2 107 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 WIPF1O43516 503 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 CDS2O95674 445 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 ANXA3P12429 323 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 HSPE1P61604 102 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 DEFA5Q01523 94 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 ZNF429Q86V71 674 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 OR10W1Q8NGF6 305 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 GLYATL2Q8WU03 294 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 EEF1AKMT3Q96AZ1 226 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 CXorf58Q96LI9 332 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 PDCD10Q9BUL8 212 aa13.31□□□□□ -0.28
SHKBP1-212ENST00000596163 MEGF8Q7Z7M0 2845 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 IGLV11-55A0A075B6I3 123 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 CENPXA8MT69 81 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 IGKV1-5P01602 117 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 AKR1C4P17516 323 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 EGFEM1PQ0D2K5 195 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 RPEL1Q2QD12 228 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 PDLIM3Q53GG5 364 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 LINC00299Q6ZSB3 139 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 RBPMSQ93062 196 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 GALNT14Q96FL9 552 aa13.3□□□□□ -0.28
SHKBP1-212ENST00000596163 TRBV7-1A0A0A6YYK4 115 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 A6NHS1 94 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 NDUFB8O95169 186 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 SRPXP78539 464 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 ERHP84090 104 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 WT1-ASQ06250 92 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 BAK1Q16611 211 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 SLC25A24Q6NUK1 477 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 IL22RA2Q969J5 263 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 OR4C12Q96R67 309 aa13.29□□□□□ -0.28
SHKBP1-212ENST00000596163 SAP30O75446 220 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms