RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 OR10J6PQ8NGY7 276 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 PPIAL4AQ9Y536 164 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 MYO16Q9Y6X6 1858 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 DLX6P56179 175 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 HS3ST3B1Q9Y662 390 aa12.36□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A1W2PQM1 296 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 C17orf98A8MV24 154 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 SYNGR3O43761 229 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 MST1LQ2TV78 715 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 SAMD5Q5TGI4 173 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 OR4C13Q8NGP0 309 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 CCL13Q99616 98 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 NHP2Q9NX24 153 aaKnown RBP12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A0A6YYD4 124 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 PAPPA-AS1Q5QFB9 102 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 CACNG8Q8WXS5 425 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 CYSLTR1Q9Y271 337 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 PTPRZ1P23471 2315 aaPredicted RBP12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 FAM181BA6NEQ2 426 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 NPIPB6E9PJ23 425 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 ESDP10768 282 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 TSPOP30536 169 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 RASL11AQ6T310 242 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 TMEM256Q8N2U0 113 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A1W2PRE2 83 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 IGHV4-34P06331 123 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 MFAP4P55083 255 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 VSIRQ9H7M9 311 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
SMARCA4-214ENST00000589677 IFNL4K9M1U5 179 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 IGHV2-5P01817 119 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 FTH1P19P0C7X4 201 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 GAGE1Q13065 139 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 TTTY12Q9BZ98 90 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 LINC00470Q9BZP3 86 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 UBTD1Q9HAC8 227 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 MRPS16Q9Y3D3 137 aaKnown RBP12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A1W2PRD5 423 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A1W2PRF3 423 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 A0A1W2PRM7 423 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 C12orf77C9JDV5 145 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 RAB9AP51151 201 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 KLRB1Q12918 225 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 TPTE2P1Q5T6R2 138 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 GFRALQ6UXV0 394 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 LINC01551Q86U37 167 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 CIARTQ8N365 385 aaPredicted RBP12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 IGHV1-45A0A0A0MS14 117 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 C21orf140B9A014 251 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 APOMO95445 188 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 FAM166AQ6J272 317 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 LOXL4Q96JB6 756 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 SNHG12Q9BXW3 62 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
SMARCA4-214ENST00000589677 ZNF236Q9UL36 1845 aa12.33□□□□□ -0.43
SMARCA4-214ENST00000589677 CKS1BP61024 79 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 TMEM144Q7Z5S9 345 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 KIR2DL4Q99706 377 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 BEX4Q9NWD9 120 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 COX11Q9Y6N1 276 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 RBBP6Q7Z6E9 1792 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 TRGV8A0A0C4DH27 118 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 IGKV1-9A0A0C4DH69 117 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 H3BTX0 84 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 PPP1R17O96001 155 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 IGKV1D-13A0A0B4J2D9 117 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 IGKV1-13P0DP09 117 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 SLC25A2Q9BXI2 301 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 RABAC1Q9UI14 185 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 TRAV8-2A0A0B4J237 113 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 HBDP02042 147 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 SRSF7Q16629 238 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 TMEM186Q96B77 213 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 SRXN1Q9BYN0 137 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 WDR83OSQ9Y284 106 aa12.33□□□□□ -0.44
SMARCA4-214ENST00000589677 C9JCJ5 164 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 LINC00271P0C7V0 271 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 MESP2Q0VG99 397 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 OR52E5Q8NH55 327 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 C16orf92Q96LL3 132 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 ITGB1BP1O14713 200 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 GPX1P07203 203 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 PRSS8Q16651 343 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 SLC22A18ASQ8N1D0 253 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 GBF1Q92538 1859 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 A0A0G2JLM5 398 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 CCL4P13236 92 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 ERVK11-1P61568 191 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 TSKUQ8WUA8 353 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 METTL26Q96S19 204 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 LY96Q9Y6Y9 160 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 NRN1LQ496H8 165 aa12.32□□□□□ -0.44
SMARCA4-214ENST00000589677 KLF2Q9Y5W3 355 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms