RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 LRRC75BQ2VPJ9 315 aa17.78■□□□□ 0.44
ATG4D-209ENST00000588857 FBLN7Q53RD9 439 aa17.78■□□□□ 0.44
ATG4D-209ENST00000588857 SPANXN5Q5MJ07 72 aa17.78■□□□□ 0.44
ATG4D-209ENST00000588857 SSX3Q99909 188 aa17.78■□□□□ 0.44
ATG4D-209ENST00000588857 PLEKHA3Q9HB20 300 aa17.78■□□□□ 0.44
ATG4D-209ENST00000588857 SVEP1Q4LDE5 3571 aa17.78■□□□□ 0.44
ATG4D-209ENST00000588857 C2CD3Q4AC94 2353 aa17.77■□□□□ 0.44
ATG4D-209ENST00000588857 CD5LO43866 347 aa17.77■□□□□ 0.44
ATG4D-209ENST00000588857 TNXAQ16473 311 aa17.77■□□□□ 0.44
ATG4D-209ENST00000588857 C5orf64Q2M2E5 130 aa17.77■□□□□ 0.44
ATG4D-209ENST00000588857 MRGPRG-AS1Q2M3A8 158 aa17.77■□□□□ 0.44
ATG4D-209ENST00000588857 TMEM252Q8N6L7 170 aa17.77■□□□□ 0.44
ATG4D-209ENST00000588857 IGSF23A1L1A6 192 aa17.76■□□□□ 0.43
ATG4D-209ENST00000588857 GNB1P62873 340 aa17.76■□□□□ 0.43
ATG4D-209ENST00000588857 RPP30P78346 268 aaKnown RBP17.76■□□□□ 0.43
ATG4D-209ENST00000588857 EWSR1Q01844 656 aaKnown RBP eCLIP17.76■□□□□ 0.43
ATG4D-209ENST00000588857 STX12Q86Y82 276 aa17.76■□□□□ 0.43
ATG4D-209ENST00000588857 BCL2L11O43521 198 aa17.75■□□□□ 0.43
ATG4D-209ENST00000588857 VDAC2P45880 294 aaPredicted RBP17.75■□□□□ 0.43
ATG4D-209ENST00000588857 BAXQ07812 192 aa17.75■□□□□ 0.43
ATG4D-209ENST00000588857 AANATQ16613 207 aa17.75■□□□□ 0.43
ATG4D-209ENST00000588857 ARPC5LQ9BPX5 153 aa17.75■□□□□ 0.43
ATG4D-209ENST00000588857 NDUFA4L2Q9NRX3 87 aa17.75■□□□□ 0.43
ATG4D-209ENST00000588857 PAIP2BQ9ULR5 123 aaKnown RBP17.75■□□□□ 0.43
ATG4D-209ENST00000588857 STRAPQ9Y3F4 350 aaKnown RBP17.75■□□□□ 0.43
ATG4D-209ENST00000588857 NF1P21359 2839 aa17.75■□□□□ 0.43
ATG4D-209ENST00000588857 COMPP49747 757 aaPredicted RBP17.74■□□□□ 0.43
ATG4D-209ENST00000588857 NHLH2Q02577 135 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 KRTAP1-1Q07627 177 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 C9orf139Q6ZV77 190 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 A0A1W2PN81 502 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 H3BUX3 64 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 FCN1O00602 326 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 CST7O76096 145 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 CNIH1O95406 144 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 IFNA10P01566 189 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 CHRNA7P36544 502 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 RPL27AP46776 148 aaKnown RBP17.74■□□□□ 0.43
ATG4D-209ENST00000588857 SULT1A1P50225 295 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 TMEM267Q0VDI3 215 aaPredicted RBP17.74■□□□□ 0.43
ATG4D-209ENST00000588857 DEFB112Q30KQ8 113 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 C10orf55Q5SWW7 151 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 BCL6BQ8N143 479 aaPredicted RBP17.74■□□□□ 0.43
ATG4D-209ENST00000588857 PIFOQ8TCI5 191 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 C22orf15Q8WYQ4 148 aa17.74■□□□□ 0.43
ATG4D-209ENST00000588857 TAAR5O14804 337 aa17.73■□□□□ 0.43
ATG4D-209ENST00000588857 CA2P00918 260 aa17.73■□□□□ 0.43
ATG4D-209ENST00000588857 METTL15P1P0C7V9 234 aa17.73■□□□□ 0.43
ATG4D-209ENST00000588857 MRPL41Q8IXM3 137 aaKnown RBP17.73■□□□□ 0.43
ATG4D-209ENST00000588857 OR4C12Q96R67 309 aa17.73■□□□□ 0.43
ATG4D-209ENST00000588857 RASL11BQ9BPW5 248 aa17.73■□□□□ 0.43
ATG4D-209ENST00000588857 YAE1D1Q9NRH1 226 aa17.73■□□□□ 0.43
ATG4D-209ENST00000588857 U3KQ87 197 aa17.73■□□□□ 0.43
ATG4D-209ENST00000588857 NIPBLQ6KC79 2804 aaeCLIP17.72■□□□□ 0.43
ATG4D-209ENST00000588857 TMEM14EPQ6UXP3 125 aa17.72■□□□□ 0.43
ATG4D-209ENST00000588857 TMEM217Q8N7C4 229 aa17.72■□□□□ 0.43
ATG4D-209ENST00000588857 OR10W1Q8NGF6 305 aa17.72■□□□□ 0.43
ATG4D-209ENST00000588857 RBM14Q96PK6 669 aaKnown RBP17.72■□□□□ 0.43
ATG4D-209ENST00000588857 GON7Q9BXV9 100 aa17.72■□□□□ 0.43
ATG4D-209ENST00000588857 SMIM3Q9BZL3 60 aa17.72■□□□□ 0.43
ATG4D-209ENST00000588857 FBXL17Q9UF56 701 aa17.72■□□□□ 0.43
ATG4D-209ENST00000588857 MDFIC2A0A1B0GVS7 189 aa17.71■□□□□ 0.43
ATG4D-209ENST00000588857 E7EUB6 86 aa17.71■□□□□ 0.43
ATG4D-209ENST00000588857 ERHP84090 104 aaKnown RBP17.71■□□□□ 0.43
ATG4D-209ENST00000588857 TMEM219Q86XT9 240 aa17.71■□□□□ 0.43
ATG4D-209ENST00000588857 Q8N9W7 124 aa17.71■□□□□ 0.43
ATG4D-209ENST00000588857 SLC25A33Q9BSK2 321 aa17.71■□□□□ 0.43
ATG4D-209ENST00000588857 NAV3Q8IVL0 2385 aa17.71■□□□□ 0.43
ATG4D-209ENST00000588857 MXRA5Q9NR99 2828 aa17.71■□□□□ 0.43
ATG4D-209ENST00000588857 HIVEP2P31629 2446 aa17.71■□□□□ 0.42
ATG4D-209ENST00000588857 CGB1A6NKQ9 187 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 SNCAP37840 140 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 HBG1P69891 147 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 HBG2P69892 147 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 SLC51BQ86UW2 128 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 SLC24A4Q8NFF2 622 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 SRSF12Q8WXF0 261 aaKnown RBP17.7■□□□□ 0.42
ATG4D-209ENST00000588857 BSCL2Q96G97 398 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-209ENST00000588857 ZNF471Q9BX82 626 aaPredicted RBP17.7■□□□□ 0.42
ATG4D-209ENST00000588857 PITPNC1Q9UKF7 332 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 INS-IGF2F8WCM5 200 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 OR8U8P0C7N1 319 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 HTR2BP41595 481 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 FXYD3Q14802 87 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 LY6EQ16553 131 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 OR8G2PQ6IF36 304 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 OR1S2Q8NGQ3 325 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 OR5C1Q8NGR4 320 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 MOB4Q9Y3A3 225 aa17.7■□□□□ 0.42
ATG4D-209ENST00000588857 C15orf62A8K5M9 175 aa17.69■□□□□ 0.42
ATG4D-209ENST00000588857 SCAF4O95104 1147 aaKnown RBP17.69■□□□□ 0.42
ATG4D-209ENST00000588857 NPY1RP25929 384 aa17.69■□□□□ 0.42
ATG4D-209ENST00000588857 SRP14P37108 136 aaKnown RBP17.69■□□□□ 0.42
ATG4D-209ENST00000588857 RAB11AP62491 216 aa17.69■□□□□ 0.42
ATG4D-209ENST00000588857 ZNF562Q6V9R5 426 aa17.69■□□□□ 0.42
ATG4D-209ENST00000588857 SLA2Q9H6Q3 261 aa17.69■□□□□ 0.42
ATG4D-209ENST00000588857 FN1P02751 2386 aaKnown RBP17.68■□□□□ 0.42
ATG4D-209ENST00000588857 A0A1B0GW64 132 aa17.68■□□□□ 0.42
ATG4D-209ENST00000588857 A6NDX4 124 aa17.68■□□□□ 0.42
ATG4D-209ENST00000588857 OR13C7P0DN81 318 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms