RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 F2RP25116 425 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 S100GP29377 79 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 SLURP1P55000 103 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 UCP3P55916 312 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 TATDN3Q17R31 274 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 OR4A47Q6IF82 309 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 ELOVL1Q9BW60 279 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 SLC2A9Q9NRM0 540 aa12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 PEF1Q9UBV8 284 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-225ENST00000584913 TNFSF12O43508 249 aa12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 PMP2P02689 132 aa12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 ECI1P42126 302 aa12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 KLF5Q13887 457 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 AADACL3Q5VUY0 350 aa12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 HSD17B13Q7Z5P4 300 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 SIGLEC8Q9NYZ4 499 aa12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 LSM4Q9Y4Z0 139 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-225ENST00000584913 TRAV6A0A075B6T7 132 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 C7orf66A4D0T2 115 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 SAP30O75446 220 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 PGLYRP1O75594 196 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 TRAPPC2P0DI81 140 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 TRAPPC2BP0DI82 140 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 HIST1H1BP16401 226 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 SCGB2B2Q4G0G5 96 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 LHFPL1Q86WI0 220 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 VKORC1L1Q8N0U8 176 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 OR13C8Q8NGS7 320 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 ZNF486Q96H40 463 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 SCGB3A2Q96PL1 93 aa12.87□□□□□ -0.35
CSNK1D-225ENST00000584913 TNCP24821 2201 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 A0A0B4J293 547 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 MARCH11A6NNE9 402 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 IL5P05113 134 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 TSPAN5P62079 268 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 RHOGP84095 191 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 SURF2Q15527 256 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 C10orf55Q5SWW7 151 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 SLC38A6Q8IZM9 456 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 OR51H1Q8NH63 302 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 TERB2Q8NHR7 220 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 PPP1R14BQ96C90 147 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 FYTTD1Q96QD9 318 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 OR4C12Q96R67 309 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 ALG5Q9Y673 324 aa12.86□□□□□ -0.35
CSNK1D-225ENST00000584913 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 UPK2O00526 184 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 PFDN1O60925 122 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 RLN1P04808 185 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 CTRB1P17538 263 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 PSMB6P28072 239 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 ERVK-16P61578 105 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 DEFB121Q5J5C9 76 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 CTRB2Q6GPI1 263 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 GPHA2Q96T91 129 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 COMMD5Q9GZQ3 224 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 TMEM140Q9NV12 185 aa12.85□□□□□ -0.35
CSNK1D-225ENST00000584913 CYB5BO43169 146 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 S1PR2O95136 353 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 IGLV1-51P01701 117 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 NHLRC4P0CG21 123 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 OR2B8PP59922 312 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 RND3P61587 244 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 EXOSC2Q13868 293 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 SSX9Q7RTT3 188 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 DMBX1Q8NFW5 382 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 OR9G4Q8NGQ1 327 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 GPN1Q9HCN4 374 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 PEMTQ9UBM1 199 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 FLVCR2Q9UPI3 526 aa12.84□□□□□ -0.35
CSNK1D-225ENST00000584913 A0A1B0GW64 132 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 E7EUB6 86 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 RBMXL2O75526 392 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 RPA2P15927 270 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 UBE2MP61081 183 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 CD69Q07108 199 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 C15orf32Q32M92 178 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 MRGPRFQ96AM1 343 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 FANCD2OSQ96PS1 177 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 ATP6V0BQ99437 205 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 QTRT1Q9BXR0 403 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 THYN1Q9P016 225 aa12.83□□□□□ -0.36
CSNK1D-225ENST00000584913 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 HMX3A6NHT5 357 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 CGB1A6NKQ9 187 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 SNRPGP15A8MWD9 76 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 B3GALNT1O75752 331 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 APELAP0DMC3 54 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 OR5B3Q8NH48 314 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 CXorf58Q96LI9 332 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 PRR25Q96S07 402 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 PRNDQ9UKY0 176 aa12.82□□□□□ -0.36
CSNK1D-225ENST00000584913 DNAH9Q9NYC9 4486 aa12.81□□□□□ -0.36
CSNK1D-225ENST00000584913 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms