RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 SMIM17P0DL12 118 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 ESDP10768 282 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 AKR1C4P17516 323 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 FUT3P21217 361 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 PRSS3P35030 304 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 FABP6P51161 128 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 RAB38P57729 211 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 ZNF121P58317 390 aaPredicted RBP3.61□□□□□ -1.83
SS18-223ENST00000583595 MLF1P58340 268 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 CCL7P80098 99 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 BAXQ07812 192 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 FOXF1Q12946 379 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 ARHGAP11BQ3KRB8 267 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 LRRC10Q5BKY1 277 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 CPTPQ5TA50 214 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 NOXRED1Q6NXP6 359 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 Q6ZVH6 145 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 COX15Q7KZN9 410 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 CLECL1Q8IZS7 167 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 NPWQ8N729 165 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 OR11H1Q8NG94 326 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 OR11H2Q8NH07 326 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 MAL2Q969L2 176 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 PTX4Q96A99 478 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 SLAMF6Q96DU3 332 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 SFRP2Q96HF1 295 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 ZNF681Q96N22 645 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 PRAP1Q96NZ9 151 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 SIGMAR1Q99720 223 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 ZDHHC11Q9H8X9 412 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 TMEM106BQ9NUM4 274 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 TMEM38BQ9NVV0 291 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 ZNF586Q9NXT0 402 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 OR5V1Q9UGF6 321 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 OR51B2Q9Y5P1 312 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 ANKRD12Q6UB98 2062 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 LOC285556D6RIA3 1793 aa3.61□□□□□ -1.83
SS18-223ENST00000583595 TSC2P49815 1807 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TRPM7Q96QT4 1865 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 MYO18AQ92614 2054 aaKnown RBP3.6□□□□□ -1.83
SS18-223ENST00000583595 A0A0J9YXY3 114 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TMEM150BA6NC51 233 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 MAP1LC3B2A6NCE7 125 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 OR4C45A6NMZ5 311 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 LOC730098B7Z3J9 87 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 J3QLW9 94 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 GNG7O60262 68 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 IGHV3-23P01764 117 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 CD3DP04234 171 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TYMSP04818 313 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 CHTF8P0CG12 524 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 CTSEP14091 401 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 GABRA3P34903 492 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 CEACAM3P40198 252 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 P2RY2P41231 377 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 CYB561P49447 251 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 PPOXP50336 477 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 UBE2E1P51965 193 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 CDK5R1Q15078 307 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 ELOCQ15369 112 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TMEM249Q2WGJ8 235 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TDRG1Q3Y452 100 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 C5orf47Q569G3 176 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TCEAL5Q5H9L2 206 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 ACTL10Q5JWF8 245 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 UNQ5815/PRO19632Q6UWF5 114 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TCTEX1D1Q8N7M0 179 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 FER1L6-AS1Q8NA97 138 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 CHST4Q8NCG5 386 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 OR51G1Q8NGK1 321 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 OR10J6PQ8NGY7 276 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 IL22RA2Q969J5 263 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 TMEM230Q96A57 120 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 SMIM19Q96E16 107 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 MRAP2Q96G30 205 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 OR10C1Q96KK4 312 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 UBE2E2Q96LR5 201 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 C2orf50Q96LR7 162 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 DERL3Q96Q80 235 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 MAP1LC3BQ9GZQ8 125 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 DEFB127Q9H1M4 99 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 OR52D1Q9H346 318 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 PLEKHJ1Q9NW61 149 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 VSIG4Q9Y279 399 aa3.6□□□□□ -1.83
SS18-223ENST00000583595 PDCD11Q14690 1871 aaKnown RBP3.59□□□□□ -1.83
SS18-223ENST00000583595 IGHV2-26A0A0B4J1V2 119 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 IGLC7A0M8Q6 106 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 OR6C6A6NF89 314 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 H7BYZ3 331 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 TRAF3IP2O43734 574 aaPredicted RBP3.59□□□□□ -1.83
SS18-223ENST00000583595 SLC16A7O60669 478 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 PRH1P02810 166 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 THY1P04216 161 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 CTSDP07339 412 aaPredicted RBP3.59□□□□□ -1.83
SS18-223ENST00000583595 PFN1P07737 140 aaKnown RBP3.59□□□□□ -1.83
SS18-223ENST00000583595 IGLC2P0DOY2 106 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 IGLC3P0DOY3 106 aa3.59□□□□□ -1.83
SS18-223ENST00000583595 IGFBP3P17936 291 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms