RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 EDDM3AQ14507 147 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 JOSD1Q15040 202 aaPredicted RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TMED2Q15363 201 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 MIAQ16674 131 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 NDUFA5Q16718 116 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 LRRC75BQ2VPJ9 315 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM42Q69YG0 159 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 OR10K2Q6IF99 312 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 C8orf74Q6P047 294 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 LPCAT3Q6P1A2 487 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 LYZL1Q6UWQ5 148 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAPPC5Q8IUR0 188 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 C20orf196Q8IYI0 205 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 OR6V1Q8N148 313 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 LRRC25Q8N386 305 aaPredicted RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TBC1D19Q8N5T2 526 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF565Q8N9K5 539 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 OR51T1Q8NGJ9 327 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 OR2T27Q8NH04 317 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 MRPL30Q8TCC3 161 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 SLC7A6Q92536 515 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 SLC35B4Q969S0 331 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 BORCS7Q96B45 105 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 DCUN1D1Q96GG9 259 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 BTF3L4Q96K17 158 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 CNBD2Q96M20 576 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 CCDC42Q96M95 316 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 CMSS1Q9BQ75 279 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TRIM4Q9C037 500 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 COMMD5Q9GZQ3 224 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 OR51V1Q9H2C8 321 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 OR51I1Q9H343 314 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 PRTFDC1Q9NRG1 225 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 IL20Q9NYY1 176 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 UBAP1Q9NZ09 502 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 VPS29Q9UBQ0 182 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 PRELID1Q9Y255 219 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TIMM9Q9Y5J7 89 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 SOX21Q9Y651 276 aaPredicted RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 PXMP4Q9Y6I8 212 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 DISP1Q96F81 1524 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 SMARCA4P51532 1647 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 ZCCHC11Q5TAX3 1644 aaKnown RBP0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 ADGBQ8N7X0 1667 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 DOCK4Q8N1I0 1966 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 EXPH5Q8NEV8 1989 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 SCN3AQ9NY46 2000 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 ARFGEF3Q5TH69 2177 aa0.52□□□□□ -2.33
SMCHD1-206ENST00000581631 IGHV3-64A0A075B6Q5 118 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TMED7-TICAM2A0A0A6YYA0 188 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TRAV41A0A0B4J266 112 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM269A0A1B0GVZ9 245 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 CLDN24A6NM45 220 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM114B3SHH9 223 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 EEF1E1-BLOC1S5C9J1V9 151 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 C19orf84I3L1E1 186 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 KPNA3O00505 521 aaPredicted RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 COX7A2LO14548 114 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 KLRC4O43908 158 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF737O75373 536 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 PIK3C2GO75747 1445 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 IFNA10P01566 189 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TNNC2P02585 160 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TTRP02766 147 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 SRP19P09132 144 aaKnown RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 CA5AP35218 305 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 FLT4P35916 1363 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 CCR2P41597 374 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 CSN1S1P47710 185 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 EVX1P49640 407 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TCL1AP56279 114 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TPI1P60174 286 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 SNRPD2P62316 118 aaKnown RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 ERHP84090 104 aaKnown RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TNFAIP6P98066 277 aaPredicted RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 REEP5Q00765 189 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 GLO1Q04760 184 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 PMAIP1Q13794 54 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 GRK1Q15835 563 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 IAH1Q2TAA2 248 aaPredicted RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 LGALS9BQ3B8N2 356 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 ACOT6Q3I5F7 207 aaPredicted RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM155Q4W5P6 130 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM97Q5BJF2 176 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 C1orf194Q5T5A4 169 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 C9orf64Q5T6V5 341 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 SFXN4Q6P4A7 337 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 RPL22L1Q6P5R6 122 aaKnown RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 Q6ZS49 121 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 SSX8Q7RTT4 187 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 SLC35E3Q7Z769 313 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 GPHB5Q86YW7 130 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 DYNAPQ8N1N2 210 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 CLDN22Q8N7P3 220 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 C15orf53Q8NAA6 179 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TNRC6AQ8NDV7 1962 aaKnown RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 OR1L8Q8NGR8 309 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 MCFD2Q8NI22 146 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF675Q8TD23 568 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms