RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 C5orf66Q9H5L9 145 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 NDUFA4L2Q9NRX3 87 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 PEF1Q9UBV8 284 aaKnown RBP15.42■□□□□ 0.06
SS18-218ENST00000581021 S4R3C0 116 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 DPPA5A6NC42 116 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 C15orf61A6NNL5 157 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 DISC1C4P0D8 188 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 BMPR1BO00238 502 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 P0C879 139 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 ATP5G2Q06055 141 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 TMEM14BQ9NUH8 114 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 SLC2A8Q9NY64 477 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 FBXL7Q9UJT9 491 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 OR51B2Q9Y5P1 312 aa15.41■□□□□ 0.06
SS18-218ENST00000581021 C3orf85A0A1B0GTC6 90 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 SERPINE2P07093 398 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 KLF5Q13887 457 aaPredicted RBP15.4■□□□□ 0.06
SS18-218ENST00000581021 PYDC2Q56P42 97 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 ACSM6Q6P461 480 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 OR6Q1Q8NGQ2 317 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 OR1L8Q8NGR8 309 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 ZFAND1Q8TCF1 268 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 CCDC140Q96MF4 163 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 SRSF8Q9BRL6 282 aaKnown RBP15.4■□□□□ 0.06
SS18-218ENST00000581021 COPZ2Q9P299 210 aa15.4■□□□□ 0.06
SS18-218ENST00000581021 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.39■□□□□ 0.05
SS18-218ENST00000581021 A0A0G2JRQ6 117 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 MFSD2BA6NFX1 497 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 IGHV3-23P01764 117 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 TRAPPC2P0DI81 140 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 TRAPPC2BP0DI82 140 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 S100A5P33763 92 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 MFAP2P55001 183 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 IL34Q6ZMJ4 242 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 HAPLN4Q86UW8 402 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 Q8N402 240 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 LHFPL5Q8TAF8 219 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 PRRT1Q99946 306 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 HINT2Q9BX68 163 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 PRNDQ9UKY0 176 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 GPR132Q9UNW8 380 aa15.39■□□□□ 0.05
SS18-218ENST00000581021 PPP5D1E7EU14 171 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 SAP30O75446 220 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 SNAPC5O75971 98 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 OR13C7P0DN81 318 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 ZP3P21754 424 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 UCP1P25874 307 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 ETV6P41212 452 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 SYNJ2BPP57105 145 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 SURF2Q15527 256 aaPredicted RBP15.38■□□□□ 0.05
SS18-218ENST00000581021 H2BFWTQ7Z2G1 175 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 CCDC71LQ8N9Z2 235 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 TMEM230Q96A57 120 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 PRR25Q96S07 402 aa15.38■□□□□ 0.05
SS18-218ENST00000581021 DNAH9Q9NYC9 4486 aa15.37■□□□□ 0.05
SS18-218ENST00000581021 HLA-AP01891 365 aaKnown RBP15.37■□□□□ 0.05
SS18-218ENST00000581021 OR5AC1P0C628 307 aa15.37■□□□□ 0.05
SS18-218ENST00000581021 ECI1P42126 302 aa15.37■□□□□ 0.05
SS18-218ENST00000581021 GDPD1Q8N9F7 314 aa15.37■□□□□ 0.05
SS18-218ENST00000581021 LSM10Q969L4 123 aaKnown RBP15.37■□□□□ 0.05
SS18-218ENST00000581021 SRRQ9GZT4 340 aa15.37■□□□□ 0.05
SS18-218ENST00000581021 NAA60Q9H7X0 242 aa15.37■□□□□ 0.05
SS18-218ENST00000581021 MCUBQ9NWR8 336 aa15.37■□□□□ 0.05
SS18-218ENST00000581021 A0A0B4J293 547 aa15.36■□□□□ 0.05
SS18-218ENST00000581021 DEFA4P12838 97 aa15.36■□□□□ 0.05
SS18-218ENST00000581021 THOC7Q6I9Y2 204 aaKnown RBP15.36■□□□□ 0.05
SS18-218ENST00000581021 ZNF429Q86V71 674 aa15.36■□□□□ 0.05
SS18-218ENST00000581021 OR5B3Q8NH48 314 aa15.36■□□□□ 0.05
SS18-218ENST00000581021 GLYATL2Q8WU03 294 aa15.36■□□□□ 0.05
SS18-218ENST00000581021 TSC22D3Q99576 134 aa15.36■□□□□ 0.05
SS18-218ENST00000581021 TMEM222Q9H0R3 208 aa15.36■□□□□ 0.05
SS18-218ENST00000581021 C14orf166Q9Y224 244 aaKnown RBP15.36■□□□□ 0.05
SS18-218ENST00000581021 CRYM-AS1A6NIL9 109 aa15.35■□□□□ 0.05
SS18-218ENST00000581021 DHFRP00374 187 aa15.35■□□□□ 0.05
SS18-218ENST00000581021 INSL3P51460 131 aa15.35■□□□□ 0.05
SS18-218ENST00000581021 TRIM16LQ309B1 348 aa15.35■□□□□ 0.05
SS18-218ENST00000581021 OR9G4Q8NGQ1 327 aa15.35■□□□□ 0.05
SS18-218ENST00000581021 SDHCQ99643 169 aaPredicted RBP15.35■□□□□ 0.05
SS18-218ENST00000581021 PRR13Q9NZ81 148 aa15.35■□□□□ 0.05
SS18-218ENST00000581021 HIST1H1BP16401 226 aaKnown RBP15.34■□□□□ 0.05
SS18-218ENST00000581021 RPEL1Q2QD12 228 aa15.34■□□□□ 0.05
SS18-218ENST00000581021 SPINK9Q5DT21 86 aa15.34■□□□□ 0.05
SS18-218ENST00000581021 CLEC19AQ6UXS0 136 aa15.34■□□□□ 0.05
SS18-218ENST00000581021 Q6ZRM9 215 aa15.34■□□□□ 0.05
SS18-218ENST00000581021 HSD17B13Q7Z5P4 300 aaPredicted RBP15.34■□□□□ 0.05
SS18-218ENST00000581021 OR4A16Q8NH70 328 aa15.34■□□□□ 0.05
SS18-218ENST00000581021 SCP2D1Q9UJQ7 156 aa15.34■□□□□ 0.05
SS18-218ENST00000581021 F11RQ9Y624 299 aaKnown RBP15.34■□□□□ 0.05
SS18-218ENST00000581021 TEX13DA0A0J9YY54 714 aaPredicted RBP15.33■□□□□ 0.04
SS18-218ENST00000581021 CDS2O95674 445 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 EDN2P20800 178 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 AKR1C2P52895 323 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 SUPT4H1P63272 117 aaKnown RBP15.33■□□□□ 0.04
SS18-218ENST00000581021 PRCDQ00LT1 54 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 BAK1Q16611 211 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 SPANXN2Q5MJ10 180 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 ADAMTSL5Q6ZMM2 481 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 TOMM5Q8N4H5 51 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 ZNF502Q8TBZ5 544 aa15.33■□□□□ 0.04
SS18-218ENST00000581021 FKBP11Q9NYL4 201 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms