RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
RARA-209ENST00000579727 NAA60Q9H7X0 242 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 PRR13Q9NZ81 148 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 ZNF257Q9Y2Q1 563 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 S4R3C0 116 aa12.6□□□□□ -0.39
RARA-209ENST00000579727 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 A6NHS1 94 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 CRYM-AS1A6NIL9 109 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 C15orf61A6NNL5 157 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 BRI3O95415 125 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 IGHV3-23P01764 117 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
RARA-209ENST00000579727 TRAPPC2P0DI81 140 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 TRAPPC2BP0DI82 140 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 CTRB1P17538 263 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 INPP1P49441 399 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 EXOSC2Q13868 293 aaKnown RBP12.59□□□□□ -0.39
RARA-209ENST00000579727 CNPY1Q3B7I2 92 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 KPRPQ5T749 579 aaPredicted RBP12.59□□□□□ -0.39
RARA-209ENST00000579727 TRIQKQ629K1 86 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 CTRB2Q6GPI1 263 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 LHFPL5Q8TAF8 219 aa12.59□□□□□ -0.39
RARA-209ENST00000579727 DLX4Q92988 240 aaPredicted RBP12.59□□□□□ -0.39
RARA-209ENST00000579727 TRBV9A0A0B4J1U6 114 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 A0A0G2JRQ6 117 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 NDUFB8O95169 186 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 CRYGCP07315 174 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 DEFA4P12838 97 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 AKR1C4P17516 323 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 UCP1P25874 307 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 ATP5G2Q06055 141 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 SPINK9Q5DT21 86 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 OR1L8Q8NGR8 309 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 OR4A16Q8NH70 328 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 RNASE11Q8TAA1 199 aaKnown RBP12.58□□□□□ -0.4
RARA-209ENST00000579727 USMG5Q96IX5 58 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 TSC22D3Q99576 134 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 FBXL7Q9UJT9 491 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 PRNDQ9UKY0 176 aa12.58□□□□□ -0.4
RARA-209ENST00000579727 FAM223BA6NKX1 122 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 SEC14L6B5MCN3 397 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 OVOL1O14753 267 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
RARA-209ENST00000579727 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 MECP2P51608 486 aaKnown RBP12.57□□□□□ -0.4
RARA-209ENST00000579727 KRTAP10-11P60412 298 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 C15orf32Q32M92 178 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 ZNF343Q6P1L6 599 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 TMED4Q7Z7H5 227 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 FAM223AQ8IWN6 122 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 NECAP1Q8NC96 275 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 GLYATL2Q8WU03 294 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 LSM10Q969L4 123 aaKnown RBP12.57□□□□□ -0.4
RARA-209ENST00000579727 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
RARA-209ENST00000579727 TMEM222Q9H0R3 208 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 NDUFA4L2Q9NRX3 87 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 TMEM14BQ9NUH8 114 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 DNAH3Q8TD57 4116 aa12.57□□□□□ -0.4
RARA-209ENST00000579727 DHFRP00374 187 aa12.56□□□□□ -0.4
RARA-209ENST00000579727 FGF2P09038 288 aa12.56□□□□□ -0.4
RARA-209ENST00000579727 CCR6P51684 374 aa12.56□□□□□ -0.4
RARA-209ENST00000579727 TMEM268Q5VZI3 342 aa12.56□□□□□ -0.4
RARA-209ENST00000579727 SGPP2Q8IWX5 399 aa12.56□□□□□ -0.4
RARA-209ENST00000579727 RANGRFQ9HD47 186 aaPredicted RBP12.56□□□□□ -0.4
RARA-209ENST00000579727 PEF1Q9UBV8 284 aaKnown RBP12.56□□□□□ -0.4
RARA-209ENST00000579727 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
RARA-209ENST00000579727 IGLV11-55A0A075B6I3 123 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 PPP5D1E7EU14 171 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 P0C879 139 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 IL7P13232 177 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 SELENOHQ8IZQ5 122 aaKnown RBP12.55□□□□□ -0.4
RARA-209ENST00000579727 CADM3Q8N126 398 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 OR5B3Q8NH48 314 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 RRNAD1Q96FB5 475 aaKnown RBP12.55□□□□□ -0.4
RARA-209ENST00000579727 SCGB3A2Q96PL1 93 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 AURKAIP1Q9NWT8 199 aaPredicted RBP12.55□□□□□ -0.4
RARA-209ENST00000579727 FKBP11Q9NYL4 201 aa12.55□□□□□ -0.4
RARA-209ENST00000579727 IGHV3-21A0A0B4J1V1 117 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 A0A0B4J293 547 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 MFSD2BA6NFX1 497 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 B3GALNT1O75752 331 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 ATG12O94817 140 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 CDS2O95674 445 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 MFAP2P55001 183 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 SUPT4H1P63272 117 aaKnown RBP12.54□□□□□ -0.4
RARA-209ENST00000579727 DHODHQ02127 395 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 TMEM187Q14656 261 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 C9orf66Q5T8R8 295 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 THOC7Q6I9Y2 204 aaKnown RBP12.54□□□□□ -0.4
RARA-209ENST00000579727 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 SRSF8Q9BRL6 282 aaKnown RBP12.54□□□□□ -0.4
RARA-209ENST00000579727 GPR61Q9BZJ8 451 aa12.54□□□□□ -0.4
RARA-209ENST00000579727 BMPR1BO00238 502 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 SAP30O75446 220 aa12.53□□□□□ -0.4
RARA-209ENST00000579727 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms