RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 ZNF616Q08AN1 781 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
LITAF-217ENST00000575426 ETV3LQ6ZN32 361 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 OR5B3Q8NH48 314 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 GLYATL2Q8WU03 294 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 RBPMSQ93062 196 aaKnown RBP11.8□□□□□ -0.52
LITAF-217ENST00000575426 P2RX4Q99571 388 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 PDCD10Q9BUL8 212 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 CCDC32Q9BV29 185 aa11.8□□□□□ -0.52
LITAF-217ENST00000575426 NBEAL1Q6ZS30 2694 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 PIGBOS1A0A0B4J2F0 54 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 A0A1B0GW64 132 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 FAM223BA6NKX1 122 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 C15orf61A6NNL5 157 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 PRH1P02810 166 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 HSPB1P04792 205 aaKnown RBP11.79□□□□□ -0.52
LITAF-217ENST00000575426 REG1AP05451 166 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 CRYGCP07315 174 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 AREGP15514 252 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 HIST1H1BP16401 226 aaKnown RBP11.79□□□□□ -0.52
LITAF-217ENST00000575426 CTRB1P17538 263 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 CCR6P51684 374 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 RHOGP84095 191 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 ATP5G2Q06055 141 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 TMEM268Q5VZI3 342 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 CTRB2Q6GPI1 263 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 FAM219AQ8IW50 185 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 FAM223AQ8IWN6 122 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 LINC00482Q8N8I6 264 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 NECAP1Q8NC96 275 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 WFDC9Q8NEX5 89 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
LITAF-217ENST00000575426 TMEM230Q96A57 120 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 WDR12Q9GZL7 423 aaKnown RBP11.79□□□□□ -0.52
LITAF-217ENST00000575426 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 TRRAPQ9Y4A5 3859 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 MGAM2Q2M2H8 2515 aa11.79□□□□□ -0.52
LITAF-217ENST00000575426 CGB1A6NKQ9 187 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 LINC01619G3V211 115 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
LITAF-217ENST00000575426 IGKV1-5P01602 117 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 OR13C7P0DN81 318 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 SRPXP78539 464 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 ZNF846Q147U1 533 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
LITAF-217ENST00000575426 CENPSQ8N2Z9 138 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 OR10W1Q8NGF6 305 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 RCC1LQ96I51 464 aaKnown RBP11.78□□□□□ -0.52
LITAF-217ENST00000575426 MCRIP2Q9BUT9 160 aaKnown RBP11.78□□□□□ -0.52
LITAF-217ENST00000575426 ALX4Q9H161 411 aaPredicted RBP11.78□□□□□ -0.52
LITAF-217ENST00000575426 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
LITAF-217ENST00000575426 NDUFA4L2Q9NRX3 87 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 THYN1Q9P016 225 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 FBXL7Q9UJT9 491 aa11.78□□□□□ -0.52
LITAF-217ENST00000575426 TRBV9A0A0B4J1U6 114 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 IGLC7A0M8Q6 106 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 ANKRD34BA5PLL1 514 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 OR2J3O76001 311 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 IFNA17P01571 189 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 VAMP1P23763 118 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 HSPE1P61604 102 aaKnown RBP11.77□□□□□ -0.53
LITAF-217ENST00000575426 DEFA5Q01523 94 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 TMEM187Q14656 261 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 IZUMO4Q1ZYL8 232 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 ZNF429Q86V71 674 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 LGI3Q8N145 548 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 IL22RA2Q969J5 263 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 GPR61Q9BZJ8 451 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.53
LITAF-217ENST00000575426 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 A0A087WW49 117 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 LYRM1O43325 122 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 NDUFB6O95139 128 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 IGLL1P15814 213 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 ERHP84090 104 aaKnown RBP11.76□□□□□ -0.53
LITAF-217ENST00000575426 FAM209BQ5JX69 171 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 SLC25A24Q6NUK1 477 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 SLC35G3Q8N808 338 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 OR1L6Q8NGR2 347 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 LHFPL5Q8TAF8 219 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 ENY2Q9NPA8 101 aa11.76□□□□□ -0.53
LITAF-217ENST00000575426 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.76□□□□□ -0.53
LITAF-217ENST00000575426 PEF1Q9UBV8 284 aaKnown RBP11.76□□□□□ -0.53
LITAF-217ENST00000575426 DBX1A6NMT0 343 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 G3V4G9 280 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 P0C879 139 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 ZP3P21754 424 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 UBE2MP61081 183 aaKnown RBP11.75□□□□□ -0.53
LITAF-217ENST00000575426 SUPT4H1P63272 117 aaKnown RBP11.75□□□□□ -0.53
LITAF-217ENST00000575426 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 WT1-ASQ06250 92 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 FHL3Q13643 280 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 EXOSC2Q13868 293 aaKnown RBP11.75□□□□□ -0.53
LITAF-217ENST00000575426 C15orf32Q32M92 178 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 OXLD1Q5BKU9 147 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 C1QL4Q86Z23 238 aa11.75□□□□□ -0.53
LITAF-217ENST00000575426 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms