RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DLX1P56177 255 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 CD81P60033 236 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 MIC13Q5XKP0 118 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 FAM24BQ8N5W8 94 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 VSTM2AQ8TAG5 236 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 SSMEM1Q8WWF3 244 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 CBLN4Q9NTU7 201 aa11.4□□□□□ -0.58
VPS33B-208ENST00000574755 LSM4Q9Y4Z0 139 aaKnown RBP11.4□□□□□ -0.58
VPS33B-208ENST00000574755 MALRD1Q5VYJ5 2156 aa11.4□□□□□ -0.59
VPS33B-208ENST00000574755 SEC14L6B5MCN3 397 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 OR2C1O95371 312 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 OR10W1Q8NGF6 305 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 NEIL1Q96FI4 390 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-208ENST00000574755 PCGF1Q9BSM1 259 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 KCNIP2Q9NS61 270 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 IGHV2-26A0A0B4J1V2 119 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 PPIAL4CA0A0B4J2A2 164 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 YIF1AO95070 293 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 PPIAL4GP0DN37 164 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 PRB3Q04118 309 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-208ENST00000574755 OR8B3Q8NGG8 313 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 C1orf159Q96HA4 380 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 OR8B2Q96RD0 313 aa11.39□□□□□ -0.59
VPS33B-208ENST00000574755 ZNF727A8MUV8 499 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 MC5RP33032 325 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 B2MP61769 119 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 RAB31Q13636 194 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 OR1L8Q8NGR8 309 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 RAB1CQ92928 201 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 TNFRSF14Q92956 283 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 A0A087WWC5 75 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 ENSAO43768 121 aaKnown RBP11.38□□□□□ -0.59
VPS33B-208ENST00000574755 SOD3P08294 240 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 FOLR2P14207 255 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 PRRX1P54821 245 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 PNRC1Q12796 327 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-208ENST00000574755 C2orf83Q53S99 150 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 ZFP82Q8N141 532 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 OR4A5Q8NH83 315 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 TMEM167AQ8TBQ9 72 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 MIOXQ9UGB7 285 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 TACC2O95359 2948 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 HIVEP3Q5T1R4 2406 aa11.38□□□□□ -0.59
VPS33B-208ENST00000574755 IGHV3-72A0A0B4J1Y9 119 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 PAGE4O60829 102 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 CTRB1P17538 263 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 HLA-DRB5Q30154 266 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 WDR25Q64LD2 544 aaPredicted RBP11.37□□□□□ -0.59
VPS33B-208ENST00000574755 CTRB2Q6GPI1 263 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 STPG3Q8N7X2 389 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 OR4F5Q8NH21 305 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 TIMD4Q96H15 378 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 OR4F4Q96R69 305 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 CLEC7AQ9BXN2 247 aa11.37□□□□□ -0.59
VPS33B-208ENST00000574755 SPTBN1Q01082 2364 aaKnown RBP11.37□□□□□ -0.59
VPS33B-208ENST00000574755 hCG_1809904A0A1W2PP81 198 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 A0A1W2PR64 198 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 A0A1W2PRV1 198 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 FNDC10F2Z333 226 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 SLC25A17O43808 307 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 IGLV1-47P01700 117 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 IGLV2-23P01705 113 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 RNASE2P10153 161 aaKnown RBP11.36□□□□□ -0.59
VPS33B-208ENST00000574755 IGFBP2P18065 325 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 ATP5IP56385 69 aaPredicted RBP11.36□□□□□ -0.59
VPS33B-208ENST00000574755 ERHP84090 104 aaKnown RBP11.36□□□□□ -0.59
VPS33B-208ENST00000574755 ZNF674Q2M3X9 581 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 BSXQ3C1V8 233 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 VMA21Q3ZAQ7 101 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 RNF212Q495C1 297 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 C11orf71Q6IPW1 123 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 C2CD4CQ8TF44 421 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 FAM122AQ96E09 287 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 SMIM7Q9BQ49 75 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 B4DEV8 164 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 E7EUB6 86 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 TMEM250H0YL14 139 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 RAB5AP20339 215 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 MOB3BQ86TA1 216 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 RPUSD4Q96CM3 377 aaKnown RBP11.36□□□□□ -0.59
VPS33B-208ENST00000574755 ZNF430Q9H8G1 570 aaPredicted RBP11.36□□□□□ -0.59
VPS33B-208ENST00000574755 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
VPS33B-208ENST00000574755 A0A1W2PN81 502 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 RBP4P02753 201 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 COX7A1P24310 79 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 CHRNA7P36544 502 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 RPL29P47914 159 aaKnown RBP11.35□□□□□ -0.59
VPS33B-208ENST00000574755 C10orf55Q5SWW7 151 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 RITA1Q96K30 269 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 SAV1Q9H4B6 383 aaPredicted RBP11.35□□□□□ -0.59
VPS33B-208ENST00000574755 ONECUT1Q9UBC0 465 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 C1orf196B1AJZ1 125 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 BUB1B-PAK6H3BSN5 160 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 DLL1O00548 723 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 ARL14EPLP0DKL9 152 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 RAB5BP61020 215 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
VPS33B-208ENST00000574755 C8orf46Q8TAG6 207 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms