RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PRR20BP86481 221 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 PRR20AP86496 221 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 MSMPQ1L6U9 139 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 SPRNQ5BIV9 151 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 MOGAT3Q86VF5 341 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 HSPB9Q9BQS6 159 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 PSG5Q15238 335 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 OR2V2Q96R30 315 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 PLSCR4Q9NRQ2 329 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 HELTA6NFD8 242 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 ESDP10768 282 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 AREGP15514 252 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 RAB4AP20338 218 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 CFHR2P36980 270 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 ZNF705AQ6ZN79 300 aaPredicted RBP12.85□□□□□ -0.35
NUP88-207ENST00000573584 C1orf174Q8IYL3 243 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 CORO2AQ92828 525 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 GUCD1Q96NT3 240 aa12.85□□□□□ -0.35
NUP88-207ENST00000573584 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 LINC00869P0C866 280 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 GNG4P50150 75 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 OR8I2Q8N0Y5 310 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 IDI2-AS1Q9NZ38 188 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 OR51B2Q9Y5P1 312 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 V9GYV3 84 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 HEATR1Q9H583 2144 aaKnown RBP12.84□□□□□ -0.35
NUP88-207ENST00000573584 AHRRA9YTQ3 701 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 CGB3P0DN86 165 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 CGB7P0DN87 165 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 TPTE2P1Q5T6R2 138 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 LYG1Q8N1E2 194 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 FDCSPQ8NFU4 85 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 OR5AU1Q8NGC0 362 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 NEUROG1Q92886 237 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 SAMD10Q9BYL1 202 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 PARD6AQ9NPB6 346 aa12.84□□□□□ -0.35
NUP88-207ENST00000573584 ZNF71Q9NQZ8 489 aaPredicted RBP12.84□□□□□ -0.35
NUP88-207ENST00000573584 CRYBB3P26998 211 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.36
NUP88-207ENST00000573584 CENPWQ5EE01 88 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 BHLHA15Q7RTS1 189 aaPredicted RBP12.83□□□□□ -0.36
NUP88-207ENST00000573584 FAM122AQ96E09 287 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 F2Z2F3 143 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 ITGB1BP1O14713 200 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 NKX2-8O15522 239 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 TDGF1P3P51864 188 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 FAM201AQ5SY85 155 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 SARAFQ96BY9 339 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 IL19Q9UHD0 177 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 SLC45A2Q9UMX9 530 aa12.83□□□□□ -0.36
NUP88-207ENST00000573584 SPENQ96T58 3664 aaKnown RBP12.82□□□□□ -0.36
NUP88-207ENST00000573584 KBTBD11-OT1A0A1B0GTJ5 212 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 Q0VG73 95 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 ST6GALNAC3Q8NDV1 305 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 NABP2Q9BQ15 211 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 TMEM167BQ9NRX6 74 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 SLC25A10Q9UBX3 287 aaPredicted RBP12.82□□□□□ -0.36
NUP88-207ENST00000573584 PROCRQ9UNN8 238 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 J3QR06 171 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 SPRY3O43610 288 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 SPINK4O60575 86 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 G0S2P27469 103 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 CDKN1AP38936 164 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 TEX43Q6ZNM6 134 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 MOB3BQ86TA1 216 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.82□□□□□ -0.36
NUP88-207ENST00000573584 SFXN3Q9BWM7 321 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 GNB1LQ9BYB4 327 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 COLQQ9Y215 455 aaPredicted RBP12.82□□□□□ -0.36
NUP88-207ENST00000573584 TNFSF13O75888 250 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 SP9P0CG40 484 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 ZNF83P51522 516 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 PLA2G2CQ5R387 149 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 DOLPP1Q86YN1 238 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 STARD4Q96DR4 205 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 PLEKHA3Q9HB20 300 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 RAB9BQ9NP90 201 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 SLC25A15Q9Y619 301 aa12.82□□□□□ -0.36
NUP88-207ENST00000573584 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 FNDC10F2Z333 226 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 LHBP01229 141 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 ADTRPQ96IZ2 230 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 RNASE7Q9H1E1 156 aaKnown RBP12.81□□□□□ -0.36
NUP88-207ENST00000573584 TECRQ9NZ01 308 aaKnown RBP12.81□□□□□ -0.36
NUP88-207ENST00000573584 NAT8BQ9UHF3 227 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 PRNDQ9UKY0 176 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 PAM16Q9Y3D7 125 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 ARL2-SNX15V9GYD0 113 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 OR7C2O60412 319 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 GATA2P23769 480 aaPredicted RBP12.81□□□□□ -0.36
NUP88-207ENST00000573584 VHLLQ6RSH7 139 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 C20orf144Q9BQM9 153 aa12.81□□□□□ -0.36
NUP88-207ENST00000573584 GNG10P50151 68 aa12.8□□□□□ -0.36
NUP88-207ENST00000573584 RPL19P84098 196 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms