RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 BRI3O95415 125 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 TRGV3P03979 118 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 TRAPPC2P0DI81 140 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 TRAPPC2BP0DI82 140 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 APELAP0DMC3 54 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 VAMP1P23763 118 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 BTCP35070 178 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 RAB25P57735 213 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 TPPP2P59282 170 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 OR2B8PP59922 312 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 TMEM187Q14656 261 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 TMEM268Q5VZI3 342 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 LCNL1Q6ZST4 164 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 LGI3Q8N145 548 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 KLHL30-AS1Q8NEE0 82 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 MYOZ3Q8TDC0 251 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 KLK15Q9H2R5 256 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 TMEM14BQ9NUH8 114 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 NSG2Q9Y328 171 aa10.54□□□□□ -0.72
RPAIN-213ENST00000573577 A0A0G2JLM5 398 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 TEX50A0A1B0GTY4 177 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 HMX3A6NHT5 357 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 NPIPB5A8MRT5 1133 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 E7EUB6 86 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 CYB5BO43169 146 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 CD33P20138 364 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 SUPT4H1P63272 117 aaKnown RBP10.53□□□□□ -0.72
RPAIN-213ENST00000573577 ASAH1Q13510 395 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 ETV3LQ6ZN32 361 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 C18orf65Q6ZTR6 163 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 C8orf86Q6ZUL3 223 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 ZNF429Q86V71 674 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 SELENOHQ8IZQ5 122 aaKnown RBP10.53□□□□□ -0.72
RPAIN-213ENST00000573577 ZNF491Q8N8L2 437 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 WFDC9Q8NEX5 89 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 C4orf3Q8WVX3 66 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 LSM10Q969L4 123 aaKnown RBP10.53□□□□□ -0.72
RPAIN-213ENST00000573577 MS4A10Q96PG2 267 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 PDCD10Q9BUL8 212 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 NDUFA4L2Q9NRX3 87 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 CACFD1Q9UGQ2 172 aa10.53□□□□□ -0.72
RPAIN-213ENST00000573577 A0A0B4J2A0 478 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 C13orf42A0A1B0GVH6 325 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 FAM240BA0A1B0GVZ2 78 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 DUXBA0A1W2PPF3 345 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 SFT2D2O95562 160 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 P0C879 139 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 DEFA4P12838 97 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 MYOD1P15172 320 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 PSMB6P28072 239 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 DEFA1P59665 94 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 DEFA3P59666 94 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 PPP1R1AQ13522 171 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 CASTOR1Q8WTX7 329 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 USMG5Q96IX5 58 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 HINT2Q9BX68 163 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 C20orf85Q9H1P6 137 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 SHPKQ9UHJ6 478 aa10.52□□□□□ -0.73
RPAIN-213ENST00000573577 A0A1B0GW64 132 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 FAM223BA6NKX1 122 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 WIPF1O43516 503 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 HLA-AP01891 365 aaKnown RBP10.51□□□□□ -0.73
RPAIN-213ENST00000573577 TCRBP04435 133 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 CRYGCP07315 174 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 HIST1H1BP16401 226 aaKnown RBP10.51□□□□□ -0.73
RPAIN-213ENST00000573577 MECP2P51608 486 aaKnown RBP10.51□□□□□ -0.73
RPAIN-213ENST00000573577 HSPE1P61604 102 aaKnown RBP10.51□□□□□ -0.73
RPAIN-213ENST00000573577 RUNX1Q01196 453 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 KIAA0141Q14154 515 aaPredicted RBP10.51□□□□□ -0.73
RPAIN-213ENST00000573577 OXLD1Q5BKU9 147 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 KPRPQ5T749 579 aaPredicted RBP10.51□□□□□ -0.73
RPAIN-213ENST00000573577 FAM223AQ8IWN6 122 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 SLC35G3Q8N808 338 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 LINC00482Q8N8I6 264 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.51□□□□□ -0.73
RPAIN-213ENST00000573577 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 FLVCR2Q9UPI3 526 aa10.51□□□□□ -0.73
RPAIN-213ENST00000573577 NOTCH3Q9UM47 2321 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 A0A0B4J293 547 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 IGLC7A0M8Q6 106 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 CGB1A6NKQ9 187 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 IFNA17P01571 189 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 OR4E1P0C645 316 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 OR13C7P0DN81 318 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 AREGP15514 252 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 IGLL1P15814 213 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 CTRB1P17538 263 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 MYCNOSP40205 109 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 PRCDQ00LT1 54 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 CTRB2Q6GPI1 263 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 LRTM2Q8N967 370 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 NECAP1Q8NC96 275 aa10.5□□□□□ -0.73
RPAIN-213ENST00000573577 OR1L6Q8NGR2 347 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms