RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 LHFPL5Q8TAF8 219 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 ZFAND1Q8TCF1 268 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 RCC1LQ96I51 464 aaKnown RBP7.56□□□□□ -1.2
CLK3-220ENST00000567992 FANCD2OSQ96PS1 177 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 NAA60Q9H7X0 242 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 ZNF355PQ9NSJ1 428 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 COPZ2Q9P299 210 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 ZNF257Q9Y2Q1 563 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 NSG2Q9Y328 171 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 DMRT1Q9Y5R6 373 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 TEX50A0A1B0GTY4 177 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 CRYM-AS1A6NIL9 109 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 C15orf61A6NNL5 157 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 WIPF1O43516 503 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 REG1AP05451 166 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 OR8U8P0C7N1 319 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 SLURP1P55000 103 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 RHOGP84095 191 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 WT1-ASQ06250 92 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 ZNF616Q08AN1 781 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 SP6Q3SY56 376 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 TOMM5Q8N4H5 51 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 ZBTB8BQ8NAP8 495 aaPredicted RBP7.55□□□□□ -1.2
CLK3-220ENST00000567992 OR10W1Q8NGF6 305 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 QTRT1Q9BXR0 403 aaKnown RBP7.55□□□□□ -1.2
CLK3-220ENST00000567992 COMMD5Q9GZQ3 224 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 TMEM222Q9H0R3 208 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 NDUFA4L2Q9NRX3 87 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 TMEM14BQ9NUH8 114 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 MCUBQ9NWR8 336 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 SCP2D1Q9UJQ7 156 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 C14orf166Q9Y224 244 aaKnown RBP7.55□□□□□ -1.2
CLK3-220ENST00000567992 TGP01266 2768 aa7.55□□□□□ -1.2
CLK3-220ENST00000567992 IGLV11-55A0A075B6I3 123 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 A0A0G2JLM5 398 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 A0A0G2JRQ6 117 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 C13orf42A0A1B0GVH6 325 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 FAM223BA6NKX1 122 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 LINC01619G3V211 115 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 OR2J3O76001 311 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 SERPINE2P07093 398 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 OR5AC1P0C628 307 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 RAB25P57735 213 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 AP3S2P59780 193 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 KRTAP10-11P60412 298 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 SUPT4H1P63272 117 aaKnown RBP7.54□□□□□ -1.2
CLK3-220ENST00000567992 DEFA6Q01524 100 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 EGFEM1PQ0D2K5 195 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 IZUMO4Q1ZYL8 232 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 ZNF343Q6P1L6 599 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 SLC25A42Q86VD7 318 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 FAM223AQ8IWN6 122 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 GLYATL2Q8WU03 294 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 DEDD2Q8WXF8 326 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 USMG5Q96IX5 58 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 SRSF8Q9BRL6 282 aaKnown RBP7.54□□□□□ -1.2
CLK3-220ENST00000567992 PRNDQ9UKY0 176 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 OR51B2Q9Y5P1 312 aa7.54□□□□□ -1.2
CLK3-220ENST00000567992 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 A0A0B4J293 547 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 B3GALNT1O75752 331 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 NDUFB8O95169 186 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 DUS4LO95620 317 aaKnown RBP7.53□□□□□ -1.2
CLK3-220ENST00000567992 CDS2O95674 445 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 HSPB1P04792 205 aaKnown RBP7.53□□□□□ -1.2
CLK3-220ENST00000567992 TRAPPC2P0DI81 140 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 TRAPPC2BP0DI82 140 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 HOXD3P31249 432 aaPredicted RBP7.53□□□□□ -1.2
CLK3-220ENST00000567992 BTCP35070 178 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 FAUP35544 74 aaKnown RBP7.53□□□□□ -1.2
CLK3-220ENST00000567992 MFAP2P55001 183 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 EXOSC2Q13868 293 aaKnown RBP7.53□□□□□ -1.2
CLK3-220ENST00000567992 C15orf32Q32M92 178 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 THOC7Q6I9Y2 204 aaKnown RBP7.53□□□□□ -1.2
CLK3-220ENST00000567992 H2BFWTQ7Z2G1 175 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 NECAP1Q8NC96 275 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 OR1L8Q8NGR8 309 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 OR5B3Q8NH48 314 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 DCUN1D4Q92564 292 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 DLX4Q92988 240 aaPredicted RBP7.53□□□□□ -1.2
CLK3-220ENST00000567992 GALNT14Q96FL9 552 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 TMEM56Q96MV1 263 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 FAM210AQ96ND0 272 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 TMEM56-RWDD3S4R434 201 aa7.53□□□□□ -1.2
CLK3-220ENST00000567992 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.52□□□□□ -1.21
CLK3-220ENST00000567992 TEX13DA0A0J9YY54 714 aaPredicted RBP7.52□□□□□ -1.21
CLK3-220ENST00000567992 ANKRD34BA5PLL1 514 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 SNAPC5O75971 98 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 PRB2P02812 416 aaPredicted RBP7.52□□□□□ -1.21
CLK3-220ENST00000567992 IL7P13232 177 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 SPNP16150 400 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 AKR1C2P52895 323 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 PRCDQ00LT1 54 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 TMEM187Q14656 261 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 AARDQ4LEZ3 155 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 TRIQKQ629K1 86 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 ZNF57Q68EA5 555 aaPredicted RBP7.52□□□□□ -1.21
CLK3-220ENST00000567992 Q6ZRM9 215 aa7.52□□□□□ -1.21
CLK3-220ENST00000567992 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms