RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 IGKV1D-39P04432 117 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 SERPINE2P07093 398 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 TRAPPC2P0DI81 140 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 TRAPPC2BP0DI82 140 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 PTBP1P26599 531 aaKnown RBP eCLIP19.25■□□□□ 0.67
FANCA-228ENST00000567943 CD69Q07108 199 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 OR1L8Q8NGR8 309 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 MRGPRFQ96AM1 343 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 SEC22AQ96IW7 307 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 SRSF8Q9BRL6 282 aaKnown RBP19.25■□□□□ 0.67
FANCA-228ENST00000567943 HINT2Q9BX68 163 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 COPZ2Q9P299 210 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 OR51B2Q9Y5P1 312 aa19.25■□□□□ 0.67
FANCA-228ENST00000567943 H0Y980 276 aa19.24■□□□□ 0.67
FANCA-228ENST00000567943 ZNF701M0R085 212 aaPredicted RBP19.24■□□□□ 0.67
FANCA-228ENST00000567943 KLF5Q13887 457 aaPredicted RBP19.24■□□□□ 0.67
FANCA-228ENST00000567943 RPEL1Q2QD12 228 aa19.24■□□□□ 0.67
FANCA-228ENST00000567943 OR4C12Q96R67 309 aa19.24■□□□□ 0.67
FANCA-228ENST00000567943 TP53RKQ96S44 253 aa19.24■□□□□ 0.67
FANCA-228ENST00000567943 TSC22D3Q99576 134 aa19.24■□□□□ 0.67
FANCA-228ENST00000567943 PRNDQ9UKY0 176 aa19.24■□□□□ 0.67
FANCA-228ENST00000567943 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.23■□□□□ 0.67
FANCA-228ENST00000567943 ANKRD20A5PA0PJZ0 165 aa19.23■□□□□ 0.67
FANCA-228ENST00000567943 CTSDP07339 412 aaPredicted RBP19.23■□□□□ 0.67
FANCA-228ENST00000567943 SPNP16150 400 aa19.23■□□□□ 0.67
FANCA-228ENST00000567943 HIST1H1BP16401 226 aaKnown RBP19.23■□□□□ 0.67
FANCA-228ENST00000567943 SYNJ2BPP57105 145 aa19.23■□□□□ 0.67
FANCA-228ENST00000567943 DCTN2Q13561 401 aaKnown RBP19.23■□□□□ 0.67
FANCA-228ENST00000567943 THOC7Q6I9Y2 204 aaKnown RBP19.23■□□□□ 0.67
FANCA-228ENST00000567943 H2BFWTQ7Z2G1 175 aa19.23■□□□□ 0.67
FANCA-228ENST00000567943 CCDC71LQ8N9Z2 235 aa19.23■□□□□ 0.67
FANCA-228ENST00000567943 ELOVL1Q9BW60 279 aa19.23■□□□□ 0.67
FANCA-228ENST00000567943 IGLV11-55A0A075B6I3 123 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 C3orf85A0A1B0GTC6 90 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 BMPR1BO00238 502 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 S100A5P33763 92 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 KLK9Q2XQG4 91 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 IL34Q6ZMJ4 242 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 HAPLN4Q86UW8 402 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 NDUFA4L2Q9NRX3 87 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 FKBP11Q9NYL4 201 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 KLK9Q9UKQ9 250 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 S4R3C0 116 aa19.22■□□□□ 0.67
FANCA-228ENST00000567943 DBX1A6NMT0 343 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 C15orf61A6NNL5 157 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 LY86O95711 162 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 IGHV3-23P01764 117 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 OR13C7P0DN81 318 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 WT1-ASQ06250 92 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 HSD17B13Q7Z5P4 300 aaPredicted RBP19.21■□□□□ 0.67
FANCA-228ENST00000567943 OR51S1Q8NGJ8 323 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 OR9G4Q8NGQ1 327 aa19.21■□□□□ 0.67
FANCA-228ENST00000567943 THAP7Q9BT49 309 aaPredicted RBP19.21■□□□□ 0.67
FANCA-228ENST00000567943 C14orf166Q9Y224 244 aaKnown RBP19.21■□□□□ 0.67
FANCA-228ENST00000567943 TATDN3Q17R31 274 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 SP6Q3SY56 376 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 PYDC2Q56P42 97 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 OR5B3Q8NH48 314 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 OR4A16Q8NH70 328 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 LSM10Q969L4 123 aaKnown RBP19.2■□□□□ 0.66
FANCA-228ENST00000567943 PRRT1Q99946 306 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 TMEM14BQ9NUH8 114 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 V9GYH0 126 aa19.2■□□□□ 0.66
FANCA-228ENST00000567943 PPP5D1E7EU14 171 aa19.19■□□□□ 0.66
FANCA-228ENST00000567943 SURF2Q15527 256 aaPredicted RBP19.19■□□□□ 0.66
FANCA-228ENST00000567943 TRIM16LQ309B1 348 aa19.19■□□□□ 0.66
FANCA-228ENST00000567943 FAM209BQ5JX69 171 aa19.19■□□□□ 0.66
FANCA-228ENST00000567943 GDPD1Q8N9F7 314 aa19.19■□□□□ 0.66
FANCA-228ENST00000567943 OR6Q1Q8NGQ2 317 aa19.19■□□□□ 0.66
FANCA-228ENST00000567943 EEF1AKMT3Q96AZ1 226 aa19.19■□□□□ 0.66
FANCA-228ENST00000567943 RTBDNQ9BSG5 229 aaPredicted RBP19.19■□□□□ 0.66
FANCA-228ENST00000567943 DMRT1Q9Y5R6 373 aa19.19■□□□□ 0.66
FANCA-228ENST00000567943 IGLV1-51P01701 117 aa19.18■□□□□ 0.66
FANCA-228ENST00000567943 IZUMO4Q1ZYL8 232 aa19.18■□□□□ 0.66
FANCA-228ENST00000567943 CLEC19AQ6UXS0 136 aa19.18■□□□□ 0.66
FANCA-228ENST00000567943 CCDC140Q96MF4 163 aa19.18■□□□□ 0.66
FANCA-228ENST00000567943 TMEM56Q96MV1 263 aa19.18■□□□□ 0.66
FANCA-228ENST00000567943 C5orf66Q9H5L9 145 aa19.18■□□□□ 0.66
FANCA-228ENST00000567943 MCUBQ9NWR8 336 aa19.18■□□□□ 0.66
FANCA-228ENST00000567943 MFSD2BA6NFX1 497 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 IGKV1-5P01602 117 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 GP9P14770 177 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 MECP2P51608 486 aaKnown RBP19.17■□□□□ 0.66
FANCA-228ENST00000567943 AKR1C2P52895 323 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 CCDC190Q86UF4 302 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 SLC2A8Q9NY64 477 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 THYN1Q9P016 225 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 SCP2D1Q9UJQ7 156 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 GPR132Q9UNW8 380 aa19.17■□□□□ 0.66
FANCA-228ENST00000567943 TENM3Q9P273 2699 aa19.16■□□□□ 0.66
FANCA-228ENST00000567943 TEX13DA0A0J9YY54 714 aaPredicted RBP19.16■□□□□ 0.66
FANCA-228ENST00000567943 CYB5BO43169 146 aa19.16■□□□□ 0.66
FANCA-228ENST00000567943 HLA-AP01891 365 aaKnown RBP19.16■□□□□ 0.66
FANCA-228ENST00000567943 UCP1P25874 307 aa19.16■□□□□ 0.66
FANCA-228ENST00000567943 ZNF79Q15937 498 aa19.16■□□□□ 0.66
FANCA-228ENST00000567943 SLC25A24Q6NUK1 477 aa19.16■□□□□ 0.66
FANCA-228ENST00000567943 Q8N402 240 aa19.16■□□□□ 0.66
FANCA-228ENST00000567943 CXorf58Q96LI9 332 aa19.16■□□□□ 0.66
FANCA-228ENST00000567943 GGCTO75223 188 aaKnown RBP19.15■□□□□ 0.66
FANCA-228ENST00000567943 B3GALNT1O75752 331 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms