RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	NHLH1	Q02575	133 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	SPATA31B1P	Q5VZV4	182 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	DUX4L9	Q6RFH8	374 aa	Predicted RBP	10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZNF664	Q8N3J9	261 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	FAM222B	Q8WU58	562 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ITLN1	Q8WWA0	313 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ABHD17A	Q96GS6	310 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ELOVL5	Q9NYP7	299 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	IGLV3-9	A0A075B6K5	115 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507		A0A0U1RQK1	487 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZNF320	A2RRD8	509 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507		M0R1B8	84 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	SPRY3	O43610	288 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	GCG	P01275	180 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	GLRX	P35754	106 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	KLF3	P57682	345 aa	Predicted RBP	10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	TEPP	Q6URK8	271 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	TCF23	Q7RTU1	214 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	STPG3	Q8N7X2	389 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZNF439	Q8NDP4	499 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	SLC24A4	Q8NFF2	622 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	SGMS2	Q8NHU3	365 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	OCC1	Q8TAD7	63 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	ASH1L	Q9NR48	2969 aa	Known RBP	10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	DLL1	O00548	723 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	NPY1R	P25929	384 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	GCHFR	P30047	84 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	GATA4	P43694	442 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	TIMM23B	Q5SRD1	257 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	IDI2-AS1	Q9NZ38	188 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	DSCAML1	Q8TD84	2053 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	COL6A6	A6NMZ7	2263 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	CA2	P00918	260 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	MYOD1	P15172	320 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	TIMP3	P35625	211 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	RPL29	P47914	159 aa	Known RBP	10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	PRR20E	P86478	221 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	PRR20C	P86479	221 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	PRR20D	P86480	221 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	PRR20B	P86481	221 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	PRR20A	P86496	221 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	PRR30	Q53SZ7	412 aa	Predicted RBP	10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	TEX38	Q6PEX7	206 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507		Q6ZS92	163 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	SPACA3	Q8IXA5	215 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	GBGT1	Q8N5D6	347 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	FAM215A	Q9Y5M1	114 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	TRAPPC1	Q9Y5R8	145 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507	TACC2	O95359	2948 aa		10.79	□□□□□ -0.68
SCAPER-215	ENST00000565507		A8MWP6	167 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	FOXH1	O75593	365 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	RPL31	P62899	125 aa	Known RBP	10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	POU2AF1	Q16633	256 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	VHLL	Q6RSH7	139 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZNF600	Q6ZNG1	722 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	TMEM18	Q96B42	140 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	BTF3L4	Q96K17	158 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	TP53TG5	Q9Y2B4	290 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	THBS3	P49746	956 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	MRPS11	P82912	194 aa	Known RBP	10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	NEUROG1	Q92886	237 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	CHODL	Q9H9P2	273 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	GCM1	Q9NP62	436 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	SH3BGRL2	Q9UJC5	107 aa		10.78	□□□□□ -0.68
SCAPER-215	ENST00000565507	PKDREJ	Q9NTG1	2253 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507	MDFIC2	A0A1B0GVS7	189 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507		K7EN84	100 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507	RHOB	P62745	196 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507	STUM	Q69YW2	141 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507	C22orf34	Q6ZV56	151 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507	LYG1	Q8N1E2	194 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507	C11orf52	Q96A22	123 aa		10.77	□□□□□ -0.68
SCAPER-215	ENST00000565507		A0A1B0GUS0	222 aa		10.77	□□□□□ -0.69
SCAPER-215	ENST00000565507	LINC00869	P0C866	280 aa		10.77	□□□□□ -0.69
SCAPER-215	ENST00000565507	IGFBP2	P18065	325 aa		10.77	□□□□□ -0.69
SCAPER-215	ENST00000565507	YPEL3	P61236	119 aa	Predicted RBP	10.77	□□□□□ -0.69
SCAPER-215	ENST00000565507	IGFL3	Q6UXB1	125 aa		10.77	□□□□□ -0.69
SCAPER-215	ENST00000565507	LINC00574	Q9H8X3	128 aa		10.77	□□□□□ -0.69
SCAPER-215	ENST00000565507	NUPR1	O60356	82 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	MMP23A	O75900	390 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	HNF1A	P20823	631 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	CCKAR	P32238	428 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	HLA-DRB5	Q30154	266 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	C3orf36	Q3SXR2	165 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	TMEM256	Q8N2U0	113 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	OR10G8	Q8NGN5	311 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	WFIKKN1	Q96NZ8	548 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	GAFA1	Q96PS6	74 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	RNF7	Q9UBF6	113 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	POLE	Q07864	2286 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	TRGV10	A0A0A0MS01	117 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	FNDC10	F2Z333	226 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	OR4P4	Q8NGL7	312 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	ADTRP	Q96IZ2	230 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	RAB9B	Q9NP90	201 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	OR51B2	Q9Y5P1	312 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	TNC	P24821	2201 aa		10.76	□□□□□ -0.69
SCAPER-215	ENST00000565507	IGKV1OR2-108	A0A075B7D4	117 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms