RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 MCUBQ9NWR8 336 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 FKBP11Q9NYL4 201 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 PRNDQ9UKY0 176 aa13.35□□□□□ -0.27
USB1-209ENST00000564387 C13orf42A0A1B0GVH6 325 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 DBX1A6NMT0 343 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 C15orf61A6NNL5 157 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 SNAPC5O75971 98 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 IGHV3-11P01762 117 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 RHOGP84095 191 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 SP6Q3SY56 376 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 H2BFWTQ7Z2G1 175 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 NECAP1Q8NC96 275 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 GALNT14Q96FL9 552 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
USB1-209ENST00000564387 IGHV4OR15-8A0A075B7B6 117 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 A0A087WW49 117 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
USB1-209ENST00000564387 LINC01619G3V211 115 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 PRH1P02810 166 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 OR5AC1P0C628 307 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 TRAPPC2P0DI81 140 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 TRAPPC2BP0DI82 140 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 WT1-ASQ06250 92 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 CNPY1Q3B7I2 92 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 ZNF429Q86V71 674 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 C1QL4Q86Z23 238 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 TMEM56Q96MV1 263 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 SLC25A21Q9BQT8 299 aaPredicted RBP13.33□□□□□ -0.28
USB1-209ENST00000564387 OR51B2Q9Y5P1 312 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 TMEM56-RWDD3S4R434 201 aa13.33□□□□□ -0.28
USB1-209ENST00000564387 IGLV11-55A0A075B6I3 123 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 ATG12O94817 140 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 DHFRP00374 187 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 HIST1H1BP16401 226 aaKnown RBP13.32□□□□□ -0.28
USB1-209ENST00000564387 SUPT4H1P63272 117 aaKnown RBP13.32□□□□□ -0.28
USB1-209ENST00000564387 DEFA6Q01524 100 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 DHODHQ02127 395 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 EGFEM1PQ0D2K5 195 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 AARDQ4LEZ3 155 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 DPF1Q92782 380 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 GPR61Q9BZJ8 451 aa13.32□□□□□ -0.28
USB1-209ENST00000564387 RANGRFQ9HD47 186 aaPredicted RBP13.32□□□□□ -0.28
USB1-209ENST00000564387 A0A0B4J293 547 aa13.31□□□□□ -0.28
USB1-209ENST00000564387 C19orf35Q6ZS72 473 aa13.31□□□□□ -0.28
USB1-209ENST00000564387 SGPP2Q8IWX5 399 aa13.31□□□□□ -0.28
USB1-209ENST00000564387 DCUN1D4Q92564 292 aa13.31□□□□□ -0.28
USB1-209ENST00000564387 DLX4Q92988 240 aaPredicted RBP13.31□□□□□ -0.28
USB1-209ENST00000564387 LSM10Q969L4 123 aaKnown RBP13.31□□□□□ -0.28
USB1-209ENST00000564387 BATF3Q9NR55 127 aa13.31□□□□□ -0.28
USB1-209ENST00000564387 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
USB1-209ENST00000564387 NAP1L6A6NFF2 107 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 OR2J3O76001 311 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 IL7P13232 177 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 HSPE1P61604 102 aaKnown RBP13.3□□□□□ -0.28
USB1-209ENST00000564387 DEFA5Q01523 94 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 ATP5G2Q06055 141 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 TMEM187Q14656 261 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 TRIM16LQ309B1 348 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 C15orf32Q32M92 178 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 FAM209BQ5JX69 171 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 ZNF57Q68EA5 555 aaPredicted RBP13.3□□□□□ -0.28
USB1-209ENST00000564387 FAM219AQ8IW50 185 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 SELENOHQ8IZQ5 122 aaKnown RBP13.3□□□□□ -0.28
USB1-209ENST00000564387 OR4A16Q8NH70 328 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 RBPMSQ93062 196 aaKnown RBP13.3□□□□□ -0.28
USB1-209ENST00000564387 IL22RA2Q969J5 263 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 PEF1Q9UBV8 284 aaKnown RBP13.3□□□□□ -0.28
USB1-209ENST00000564387 KCNIP3Q9Y2W7 256 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 DNAH3Q8TD57 4116 aa13.3□□□□□ -0.28
USB1-209ENST00000564387 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
USB1-209ENST00000564387 A0A0G2JRQ6 117 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 INS-IGF2F8WCM5 200 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 REG1AP05451 166 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 OR13C7P0DN81 318 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 ZP3P21754 424 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 SLURP1P55000 103 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 RAB25P57735 213 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 KLF5Q13887 457 aaPredicted RBP13.29□□□□□ -0.28
USB1-209ENST00000564387 IZUMO4Q1ZYL8 232 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 TMEM128Q5BJH2 165 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 C7orf50Q9BRJ6 194 aaKnown RBP13.29□□□□□ -0.28
USB1-209ENST00000564387 FBXL7Q9UJT9 491 aa13.29□□□□□ -0.28
USB1-209ENST00000564387 OVOL1O14753 267 aa13.28□□□□□ -0.28
USB1-209ENST00000564387 NDUFB8O95169 186 aa13.28□□□□□ -0.28
USB1-209ENST00000564387 TRBV12-3P01733 135 aa13.28□□□□□ -0.28
USB1-209ENST00000564387 HOXD3P31249 432 aaPredicted RBP13.28□□□□□ -0.28
USB1-209ENST00000564387 BTCP35070 178 aa13.28□□□□□ -0.28
USB1-209ENST00000564387 AKR1C2P52895 323 aa13.28□□□□□ -0.28
USB1-209ENST00000564387 EXOSC2Q13868 293 aaKnown RBP13.28□□□□□ -0.28
USB1-209ENST00000564387 Q6ZRM9 215 aa13.28□□□□□ -0.28
USB1-209ENST00000564387 RRNAD1Q96FB5 475 aaKnown RBP13.28□□□□□ -0.28
USB1-209ENST00000564387 PTTG2Q9NZH5 202 aa13.28□□□□□ -0.28
USB1-209ENST00000564387 F11RQ9Y624 299 aaKnown RBP13.28□□□□□ -0.28
USB1-209ENST00000564387 ANKRD34BA5PLL1 514 aa13.27□□□□□ -0.29
USB1-209ENST00000564387 DEFA4P12838 97 aa13.27□□□□□ -0.29
USB1-209ENST00000564387 AKR1C4P17516 323 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms