RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 ZDHHC23Q8IYP9 409 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 CNEP1R1Q8N9A8 125 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 OCC1Q8TAD7 63 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 C11orf52Q96A22 123 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 BORCS7Q96B45 105 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 NUDT11Q96G61 164 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 NBASA2RRP1 2371 aa9.21□□□□□ -0.94
TCF4-222ENST00000564228 CACNA1BQ00975 2339 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 PGPEP1LA6NFU8 196 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 NDUFS8O00217 210 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 B4GALT1P15291 398 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 ZNF83P51522 516 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 TGFBR3Q03167 851 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 CLEC2AQ6UVW9 174 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 PET117Q6UWS5 81 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 Q6ZVH6 145 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 MMD2Q8IY49 270 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 FAM57AQ8TBR7 257 aa9.2□□□□□ -0.94
TCF4-222ENST00000564228 RAMP3O60896 148 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 SS18L1O75177 396 aaPredicted RBP9.19□□□□□ -0.94
TCF4-222ENST00000564228 IGLV2-14P01704 120 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 PMCHP20382 165 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 BCL3P20749 454 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 ARR3P36575 388 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 CX3CL1P78423 397 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 HTD2P86397 168 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 RPRMLQ8N4K4 120 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 CPT1CQ8TCG5 803 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 PIGCQ92535 297 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 SPSB4Q96A44 273 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 FOXB1Q99853 325 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 GP6Q9HCN6 339 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 SH3BGRL2Q9UJC5 107 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 ERRFI1Q9UJM3 462 aaPredicted RBP9.19□□□□□ -0.94
TCF4-222ENST00000564228 USP24Q9UPU5 2620 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 A6NJY4 79 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 H0YJW9 148 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 PRRG2O14669 202 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 P0C879 139 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 C1orf185Q5T7R7 199 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 TMEM136Q6ZRR5 245 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 FAM214BQ7L5A3 538 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 OR1L1Q8NH94 360 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 LINC00470Q9BZP3 86 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 TMEM38BQ9NVV0 291 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 NAT8BQ9UHF3 227 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 RBM7Q9Y580 266 aaKnown RBP9.19□□□□□ -0.94
TCF4-222ENST00000564228 FAM215AQ9Y5M1 114 aa9.19□□□□□ -0.94
TCF4-222ENST00000564228 TRGV10A0A0A0MS01 117 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 TMEM238LA0A1B0GVL6 79 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 TAX1BP3O14907 124 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 MPDU1O75352 247 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 CXorf1O96002 111 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 APOBEC3AP31941 199 aaPredicted RBP9.18□□□□□ -0.94
TCF4-222ENST00000564228 THBS3P49746 956 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
TCF4-222ENST00000564228 FOXF2Q12947 444 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 PSG7Q13046 419 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 PRR27Q6MZM9 219 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 VWA1Q6PCB0 445 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 SEM1Q6ZVN7 128 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 MOB1BQ7L9L4 216 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 TCF24Q7RTU0 167 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 Q8N7P7 452 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 TSKUQ8WUA8 353 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 WNT10AQ9GZT5 417 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 HES4Q9HCC6 221 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 V9GYV3 84 aa9.18□□□□□ -0.94
TCF4-222ENST00000564228 SCO2A0A1W2PP80 73 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 A0A1W2PPV4 95 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 MBD3L4A6NDZ8 208 aaPredicted RBP9.17□□□□□ -0.94
TCF4-222ENST00000564228 MBD3L3A6NE82 208 aaPredicted RBP9.17□□□□□ -0.94
TCF4-222ENST00000564228 MBD3L5A6NJ08 208 aaPredicted RBP9.17□□□□□ -0.94
TCF4-222ENST00000564228 K7EN84 100 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 AMY1AP04745 511 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 NBEAP1P0C6P0 100 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 RAC2P15153 192 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 SELENOVP59797 346 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 ZNF718Q3SXZ3 478 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 SCCPDHQ8NBX0 429 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 ST6GALNAC3Q8NDV1 305 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 OR5A2Q8NGI9 324 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 MBD3L2Q8NHZ7 208 aaPredicted RBP9.17□□□□□ -0.94
TCF4-222ENST00000564228 RCHY1Q96PM5 261 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 WDR83OSQ9Y284 106 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 A0A096LPE4 126 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 A0A1W2PPZ6 126 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 SLC17A3O00476 420 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 LINC00869P0C866 280 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 PSG1P11464 419 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 KIR2DL2P43627 348 aaPredicted RBP9.17□□□□□ -0.94
TCF4-222ENST00000564228 ARF1P84077 181 aaKnown RBP9.17□□□□□ -0.94
TCF4-222ENST00000564228 RBPJQ06330 500 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 GUSBP1Q15486 140 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 FAM71F2Q6NXP2 309 aa9.17□□□□□ -0.94
TCF4-222ENST00000564228 DOLPP1Q86YN1 238 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms