RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 VDAC2P45880 294 aaPredicted RBP17.54■□□□□ 0.4
LINC01960-201ENST00000563759 RPP30P78346 268 aaKnown RBP17.54■□□□□ 0.4
LINC01960-201ENST00000563759 MRGPRG-AS1Q2M3A8 158 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 THNSL2Q86YJ6 484 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 NANPQ8TBE9 248 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 OR4C12Q96R67 309 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 MAS1LP35410 378 aa17.53■□□□□ 0.4
LINC01960-201ENST00000563759 TMEM14EPQ6UXP3 125 aa17.53■□□□□ 0.4
LINC01960-201ENST00000563759 OR5C1Q8NGR4 320 aa17.53■□□□□ 0.4
LINC01960-201ENST00000563759 MEGF9Q9H1U4 602 aa17.53■□□□□ 0.4
LINC01960-201ENST00000563759 NDUFA4L2Q9NRX3 87 aa17.53■□□□□ 0.4
LINC01960-201ENST00000563759 BPIFB3P59826 476 aa17.52■□□□□ 0.4
LINC01960-201ENST00000563759 UBA52P62987 128 aaKnown RBP17.52■□□□□ 0.4
LINC01960-201ENST00000563759 HBG1P69891 147 aa17.52■□□□□ 0.4
LINC01960-201ENST00000563759 HBG2P69892 147 aa17.52■□□□□ 0.4
LINC01960-201ENST00000563759 CLINT1Q14677 625 aa17.52■□□□□ 0.4
LINC01960-201ENST00000563759 C5orf64Q2M2E5 130 aa17.52■□□□□ 0.4
LINC01960-201ENST00000563759 SOX21Q9Y651 276 aaPredicted RBP17.52■□□□□ 0.4
LINC01960-201ENST00000563759 ZFHX3Q15911 3703 aa17.52■□□□□ 0.4
LINC01960-201ENST00000563759 DYNLT3P51808 116 aa17.52■□□□□ 0.39
LINC01960-201ENST00000563759 OR8G2PQ6IF36 304 aa17.52■□□□□ 0.39
LINC01960-201ENST00000563759 TEX261Q6UWH6 196 aa17.52■□□□□ 0.39
LINC01960-201ENST00000563759 OR1S2Q8NGQ3 325 aa17.52■□□□□ 0.39
LINC01960-201ENST00000563759 C1RLQ9NZP8 487 aa17.52■□□□□ 0.39
LINC01960-201ENST00000563759 U3KQ87 197 aa17.52■□□□□ 0.39
LINC01960-201ENST00000563759 A0A1W2PN81 502 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 CA2P00918 260 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 CHRNA7P36544 502 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 RPL27AP46776 148 aaKnown RBP17.51■□□□□ 0.39
LINC01960-201ENST00000563759 COMPP49747 757 aaPredicted RBP17.51■□□□□ 0.39
LINC01960-201ENST00000563759 LRRC75BQ2VPJ9 315 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 RPL7L1Q6DKI1 246 aaKnown RBP17.51■□□□□ 0.39
LINC01960-201ENST00000563759 SLC24A4Q8NFF2 622 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 OR10W1Q8NGF6 305 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 ST8SIA2Q92186 375 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 SSX3Q99909 188 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 CYTL1Q9NRR1 136 aa17.51■□□□□ 0.39
LINC01960-201ENST00000563759 E7EUB6 86 aa17.5■□□□□ 0.39
LINC01960-201ENST00000563759 OR8U8P0C7N1 319 aa17.5■□□□□ 0.39
LINC01960-201ENST00000563759 TPT1P13693 172 aaKnown RBP17.5■□□□□ 0.39
LINC01960-201ENST00000563759 LILRB2Q8N423 598 aa17.5■□□□□ 0.39
LINC01960-201ENST00000563759 ACANP16112 2415 aa17.5■□□□□ 0.39
LINC01960-201ENST00000563759 C15orf62A8K5M9 175 aa17.5■□□□□ 0.39
LINC01960-201ENST00000563759 CNIH1O95406 144 aa17.5■□□□□ 0.39
LINC01960-201ENST00000563759 BORCS7-ASMTA0A0B4J1R7 106 aa17.49■□□□□ 0.39
LINC01960-201ENST00000563759 FCN1O00602 326 aa17.49■□□□□ 0.39
LINC01960-201ENST00000563759 JTBO76095 146 aa17.49■□□□□ 0.39
LINC01960-201ENST00000563759 CFDP00746 253 aaPredicted RBP17.49■□□□□ 0.39
LINC01960-201ENST00000563759 FSHBP01225 129 aa17.49■□□□□ 0.39
LINC01960-201ENST00000563759 NPY1RP25929 384 aa17.49■□□□□ 0.39
LINC01960-201ENST00000563759 MRPL41Q8IXM3 137 aaKnown RBP17.49■□□□□ 0.39
LINC01960-201ENST00000563759 STOML3Q8TAV4 291 aa17.49■□□□□ 0.39
LINC01960-201ENST00000563759 C22orf15Q8WYQ4 148 aa17.49■□□□□ 0.39
LINC01960-201ENST00000563759 CGB1A6NKQ9 187 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 RGS13O14921 159 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 IFNA7P01567 189 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 SNCAP37840 140 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 EIF5AP63241 154 aaKnown RBP17.48■□□□□ 0.39
LINC01960-201ENST00000563759 ERHP84090 104 aaKnown RBP17.48■□□□□ 0.39
LINC01960-201ENST00000563759 SLC38A11Q08AI6 406 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 ZNF266Q14584 549 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 ZNF680Q8NEM1 530 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 OR10P1Q8NGE3 313 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 SRSF12Q8WXF0 261 aaKnown RBP17.48■□□□□ 0.39
LINC01960-201ENST00000563759 WFDC1Q9HC57 220 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 H3BUX3 64 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 SCAF4O95104 1147 aaKnown RBP17.48■□□□□ 0.39
LINC01960-201ENST00000563759 HTR2BP41595 481 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 RAB11AP62491 216 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 ARL16Q0P5N6 197 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 EXOSC2Q13868 293 aaKnown RBP17.48■□□□□ 0.39
LINC01960-201ENST00000563759 HAPLN4Q86UW8 402 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 STPG2Q8N412 459 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 ATP5SQ99766 215 aa17.48■□□□□ 0.39
LINC01960-201ENST00000563759 MDFIC2A0A1B0GVS7 189 aa17.47■□□□□ 0.39
LINC01960-201ENST00000563759 A0A1B0GW64 132 aa17.47■□□□□ 0.39
LINC01960-201ENST00000563759 DFFBO76075 338 aa17.47■□□□□ 0.39
LINC01960-201ENST00000563759 ALKAL2Q6UX46 152 aa17.47■□□□□ 0.39
LINC01960-201ENST00000563759 ZNF767PQ75MW2 155 aa17.47■□□□□ 0.39
LINC01960-201ENST00000563759 TMEM219Q86XT9 240 aa17.47■□□□□ 0.39
LINC01960-201ENST00000563759 BAP18Q8IXM2 172 aa17.47■□□□□ 0.39
LINC01960-201ENST00000563759 PINX1Q96BK5 328 aaKnown RBP17.47■□□□□ 0.39
LINC01960-201ENST00000563759 IFNA4P05014 189 aa17.46■□□□□ 0.39
LINC01960-201ENST00000563759 SSBP2P81877 361 aaPredicted RBP17.46■□□□□ 0.39
LINC01960-201ENST00000563759 WT1-ASQ06250 92 aa17.46■□□□□ 0.39
LINC01960-201ENST00000563759 BCL6BQ8N143 479 aaPredicted RBP17.46■□□□□ 0.39
LINC01960-201ENST00000563759 Q8N9W7 124 aa17.46■□□□□ 0.39
LINC01960-201ENST00000563759 UBAC2Q8NBM4 344 aa17.46■□□□□ 0.39
LINC01960-201ENST00000563759 PIFOQ8TCI5 191 aa17.46■□□□□ 0.39
LINC01960-201ENST00000563759 RASL11BQ9BPW5 248 aa17.46■□□□□ 0.39
LINC01960-201ENST00000563759 SLC25A33Q9BSK2 321 aa17.46■□□□□ 0.39
LINC01960-201ENST00000563759 INS-IGF2F8WCM5 200 aa17.46■□□□□ 0.38
LINC01960-201ENST00000563759 OR13C7P0DN81 318 aa17.46■□□□□ 0.38
LINC01960-201ENST00000563759 DEFB112Q30KQ8 113 aa17.46■□□□□ 0.38
LINC01960-201ENST00000563759 ETV3LQ6ZN32 361 aa17.46■□□□□ 0.38
LINC01960-201ENST00000563759 UBQLN2Q9UHD9 624 aa17.46■□□□□ 0.38
LINC01960-201ENST00000563759 PMS2P5A8MQ11 134 aa17.45■□□□□ 0.38
LINC01960-201ENST00000563759 APELAP0DMC3 54 aa17.45■□□□□ 0.38
LINC01960-201ENST00000563759 FXYD3Q14802 87 aa17.45■□□□□ 0.38
LINC01960-201ENST00000563759 AANATQ16613 207 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms