RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 C1orf194Q5T5A4 169 aa10.73□□□□□ -0.69
USB1-207ENST00000563149 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
USB1-207ENST00000563149 PQLC2Q6ZP29 291 aa10.73□□□□□ -0.69
USB1-207ENST00000563149 LYG1Q8N1E2 194 aa10.73□□□□□ -0.69
USB1-207ENST00000563149 PLEKHA3Q9HB20 300 aa10.73□□□□□ -0.69
USB1-207ENST00000563149 ASCL3Q9NQ33 180 aa10.73□□□□□ -0.69
USB1-207ENST00000563149 TET2Q6N021 2002 aaPredicted RBP10.73□□□□□ -0.69
USB1-207ENST00000563149 K7EN84 100 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 TPPP2P59282 170 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 TAS2R45P59539 299 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 ERVFC1-1P60608 527 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 RANP62826 216 aaKnown RBP10.72□□□□□ -0.69
USB1-207ENST00000563149 SPRNQ5BIV9 151 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 SLC25A48Q6ZT89 311 aaKnown RBP10.72□□□□□ -0.69
USB1-207ENST00000563149 TMEM256Q8N2U0 113 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 CMTM2Q8TAZ6 248 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 MS4A10Q96PG2 267 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 NABP2Q9BQ15 211 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 BET1LQ9NYM9 111 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 NAGKQ9UJ70 344 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 CACNA1DQ01668 2161 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 FOXH1O75593 365 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 SCGB1D1O95968 90 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 OR4A8P0C604 315 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 TNFSF4P23510 183 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 Q0VG73 95 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 IGF2-ASQ6U949 168 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 ZNF788Q6ZQV5 615 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 ZADH2Q8N4Q0 377 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 OR1L8Q8NGR8 309 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 OR5B3Q8NH48 314 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 LEAP2Q969E1 77 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 GAFA1Q96PS6 74 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 RNF2Q99496 336 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 GNB1LQ9BYB4 327 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 MRPL18Q9H0U6 180 aaKnown RBP10.72□□□□□ -0.69
USB1-207ENST00000563149 OSTCQ9NRP0 149 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 SLC35D1Q9NTN3 355 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 RPUSD1Q9UJJ7 312 aaKnown RBP10.72□□□□□ -0.69
USB1-207ENST00000563149 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
USB1-207ENST00000563149 KIR2DL5BA0A0G2JN68 375 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 KIR2DL5BA0A0G2JPC4 375 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 HELTA6NFD8 242 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 MT-ND6P03923 174 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 OR5G3P0C626 314 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 CRISP2P16562 243 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 TNFAIP6P98066 277 aaPredicted RBP10.71□□□□□ -0.69
USB1-207ENST00000563149 SRSF6Q13247 344 aaKnown RBP10.71□□□□□ -0.69
USB1-207ENST00000563149 ZNF474Q6S9Z5 364 aaPredicted RBP10.71□□□□□ -0.69
USB1-207ENST00000563149 MIR17HGQ75NE6 70 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 TCF23Q7RTU1 214 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 KIR2DL5AQ8N109 375 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 OR1L6Q8NGR2 347 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 ZCCHC14Q8WYQ9 949 aaKnown RBP10.71□□□□□ -0.69
USB1-207ENST00000563149 MISP3Q96FF7 219 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 GCM1Q9NP62 436 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 V9GYV3 84 aa10.71□□□□□ -0.69
USB1-207ENST00000563149 TEX50A0A1B0GTY4 177 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 HNF1AP20823 631 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 GNG4P50150 75 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 PSG5Q15238 335 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 HLA-DRB5Q30154 266 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 TEX36Q5VZQ5 186 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 WDR73Q6P4I2 378 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 MRPL52Q86TS9 123 aaKnown RBP10.7□□□□□ -0.7
USB1-207ENST00000563149 MMD2Q8IY49 270 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 MRPL32Q9BYC8 188 aaKnown RBP10.7□□□□□ -0.7
USB1-207ENST00000563149 TMEM106BQ9NUM4 274 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 CACNA1GO43497 2377 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 A0A1W2PRE2 83 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 hADV38S2A0JD32 116 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 NUPR1O60356 82 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 FTH1P19P0C7X4 201 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 CT45A6P0DMU7 189 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 CT45A5P0DMU8 189 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 CT45A7P0DMV0 189 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 SELLP14151 372 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 WT1P19544 449 aaPredicted RBP10.7□□□□□ -0.7
USB1-207ENST00000563149 USF2Q15853 346 aaPredicted RBP10.7□□□□□ -0.7
USB1-207ENST00000563149 UTF1Q5T230 341 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 OSR1Q8TAX0 266 aaPredicted RBP10.7□□□□□ -0.7
USB1-207ENST00000563149 CACNG8Q8WXS5 425 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 LRFN3Q9BTN0 628 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 HINT2Q9BX68 163 aa10.7□□□□□ -0.7
USB1-207ENST00000563149 POLR3KQ9Y2Y1 108 aaPredicted RBP10.7□□□□□ -0.7
USB1-207ENST00000563149 SLC17A3O00476 420 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 IGHV1-46P01743 117 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 IRF2P14316 349 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 NDUFB7P17568 137 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 CBLN1P23435 193 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 DEFB109BQ30KR1 87 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 TIGITQ495A1 244 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 FAM201AQ5SY85 155 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 C1orf185Q5T7R7 199 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 VHLLQ6RSH7 139 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 IGFL3Q6UXB1 125 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 TP53TG3Q9ULZ0 132 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 LINC00312Q9Y6C7 94 aa10.69□□□□□ -0.7
USB1-207ENST00000563149 FCN1O00602 326 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms