RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 GGT3PA6NGU5 568 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 C21orf140B9A014 251 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 TRAPPC2LH3BP13 241 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 YEATS4O95619 227 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 C1QAP02745 245 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 RPL12P30050 165 aaKnown RBP0.66□□□□□ -2.3
DENND4A-205ENST00000562540 CAV1Q03135 178 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 PRB3Q04118 309 aaPredicted RBP0.66□□□□□ -2.3
DENND4A-205ENST00000562540 RPL18Q07020 188 aaKnown RBP0.66□□□□□ -2.3
DENND4A-205ENST00000562540 CDK10Q15131 360 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 CLVS2Q5SYC1 327 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 PIGXQ8TBF5 258 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 DIRAS2Q96HU8 199 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 YIPF3Q9GZM5 350 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 OR8D2Q9GZM6 311 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 DRC3Q9H069 523 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 FGFR1OP2Q9NVK5 253 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 TONSLQ96HA7 1378 aa0.66□□□□□ -2.3
DENND4A-205ENST00000562540 TRAV14DV4A0A0A6YYC5 116 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 A0A0A6YYH2 397 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 IRGMA1A4Y4 181 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 A6NJ64 397 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 TMEM212A6NML5 194 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 IGHV3-7P01780 117 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 FAM228BP0C875 321 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 C8orf88P0DMB2 117 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 FGF6P10767 208 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 MAP2K4P45985 399 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 EIF2B2P49770 351 aaKnown RBP0.65□□□□□ -2.31
DENND4A-205ENST00000562540 MLLT11Q13015 90 aaPredicted RBP0.65□□□□□ -2.31
DENND4A-205ENST00000562540 ZNF345Q14585 488 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 C1orf195Q5TG92 126 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 GLT8D1Q68CQ7 371 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 FAM151BQ6UXP7 276 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 FAM19A2Q8N3H0 131 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 C12orf29Q8N999 325 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 HDHD2Q9H0R4 259 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 TRABDQ9H4I3 376 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 C3orf18Q9UK00 162 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 FUT9Q9Y231 359 aa0.65□□□□□ -2.31
DENND4A-205ENST00000562540 SETD5Q9C0A6 1442 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 IGKV1-9A0A0C4DH69 117 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 FABP5P3A8MUU1 101 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 EVPLLA8MZ36 301 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 OCM2P0CE71 109 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 COX5BP10606 129 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 RUNX1Q01196 453 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 C10orf55Q5SWW7 151 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 LRRN1Q6UXK5 716 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 AAED1Q7RTV5 226 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 ZNF550Q7Z398 422 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 C10orf67Q8IYJ2 551 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 LINC00471Q8N535 108 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 WFDC11Q8NEX6 87 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 C11orf40Q8WZ69 217 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 TMEM106AQ96A25 262 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 IL36BQ9NZH7 164 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 OR5AC2Q9NZP5 309 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 KIF24Q5T7B8 1368 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 ABCC11Q96J66 1382 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 MAST2Q6P0Q8 1798 aa0.64□□□□□ -2.31
DENND4A-205ENST00000562540 TRBV20OR9-2A0A075B6H5 130 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 H0Y980 276 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 M0QZ92 97 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 CXCR6O00574 342 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 GEMIN2O14893 280 aaKnown RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 SLC16A4O15374 487 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 HCRTO43612 131 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 DEXIO95424 95 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 PRM2P04554 102 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 UCHL3P15374 230 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 MYL12AP19105 171 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 RPS4Y1P22090 263 aaKnown RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 RPS12P25398 132 aaKnown RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 CD151P48509 253 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 MAP3K7CLP57077 242 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 SUPT4H1P63272 117 aaKnown RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 DMTNQ08495 405 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 DEFB115Q30KQ5 88 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 IBA57Q5T440 356 aaKnown RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 OGFRL1Q5TC84 451 aaPredicted RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 GID4Q8IVV7 300 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 ZNF565Q8N9K5 539 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 RAB8BQ92930 207 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 CNBD2Q96M20 576 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 MRPL57Q9BQC6 102 aaKnown RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 EFCAB1Q9HAE3 211 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 SMARCA4P51532 1647 aa0.63□□□□□ -2.31
DENND4A-205ENST00000562540 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
DENND4A-205ENST00000562540 A0A1B0GV50 99 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 SHBGP04278 402 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 KRT7P08729 469 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 MAGEA2P43356 314 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 MARCKSL1P49006 195 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 STX5Q13190 355 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 ZNF846Q147U1 533 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 GRK1Q15835 563 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 LCN15Q6UWW0 184 aa0.62□□□□□ -2.31
DENND4A-205ENST00000562540 TMEM156Q8N614 296 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms