RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 EIF2B2P49770 351 aaKnown RBP0.68□□□□□ -2.3
USP8-218ENST00000561330 UBE2G2P60604 165 aa0.68□□□□□ -2.3
USP8-218ENST00000561330 SUPT4H1P63272 117 aaKnown RBP0.68□□□□□ -2.3
USP8-218ENST00000561330 RPL18Q07020 188 aaKnown RBP0.68□□□□□ -2.3
USP8-218ENST00000561330 ZNF846Q147U1 533 aa0.68□□□□□ -2.3
USP8-218ENST00000561330 PLEKHJ1Q9NW61 149 aa0.68□□□□□ -2.3
USP8-218ENST00000561330 PTPRSQ13332 1948 aa0.68□□□□□ -2.3
USP8-218ENST00000561330 A0A087WX48 190 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 C1orf232A0A0U1RR37 186 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 FUOMA2VDF0 154 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 GOLGA8KD6RF30 607 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 TYMSP04818 313 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 KCNE1P15382 129 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 RPS4Y1P22090 263 aaKnown RBP0.67□□□□□ -2.3
USP8-218ENST00000561330 CAV1Q03135 178 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 RSU1Q15404 277 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 PLEKHG7Q6ZR37 379 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 AAED1Q7RTV5 226 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 COMMD7Q86VX2 200 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 C10orf67Q8IYJ2 551 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 C11orf40Q8WZ69 217 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 CMTM5Q96DZ9 223 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 MAP1LC3AQ9H492 121 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 HEATR5BQ9P2D3 2071 aa0.67□□□□□ -2.3
USP8-218ENST00000561330 TTC21AQ8NDW8 1320 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 PFDN6O15212 129 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 KRT7P08729 469 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 CD151P48509 253 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 UBE2IP63279 158 aaKnown RBP0.66□□□□□ -2.3
USP8-218ENST00000561330 DMTNQ08495 405 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 WFDC11Q8NEX6 87 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 DIRAS2Q96HU8 199 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 IL36BQ9NZH7 164 aa0.66□□□□□ -2.3
USP8-218ENST00000561330 TRBV6-7A0A0A0MS04 114 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 FABP5P3A8MUU1 101 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 COCHO43405 550 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 MAP2K4P45985 399 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 ZNF80P51504 273 aaPredicted RBP0.65□□□□□ -2.31
USP8-218ENST00000561330 SYPL2Q5VXT5 272 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 GLT8D1Q68CQ7 371 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 LINC00471Q8N535 108 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 ATP6V1G3Q96LB4 118 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 FAM96AQ9H5X1 160 aa0.65□□□□□ -2.31
USP8-218ENST00000561330 IMP3Q9NV31 184 aaKnown RBP0.65□□□□□ -2.31
USP8-218ENST00000561330 CLPSP04118 112 aa0.64□□□□□ -2.31
USP8-218ENST00000561330 FAM228BP0C875 321 aa0.64□□□□□ -2.31
USP8-218ENST00000561330 RPL12P30050 165 aaKnown RBP0.64□□□□□ -2.31
USP8-218ENST00000561330 SKP1P63208 163 aa0.64□□□□□ -2.31
USP8-218ENST00000561330 IBA57Q5T440 356 aaKnown RBP0.64□□□□□ -2.31
USP8-218ENST00000561330 ZNF550Q7Z398 422 aa0.64□□□□□ -2.31
USP8-218ENST00000561330 UPF3BQ9BZI7 483 aaKnown RBP0.64□□□□□ -2.31
USP8-218ENST00000561330 HDHD2Q9H0R4 259 aa0.64□□□□□ -2.31
USP8-218ENST00000561330 EFCAB1Q9HAE3 211 aa0.64□□□□□ -2.31
USP8-218ENST00000561330 OR5F1O95221 314 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 PRM2P04554 102 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 MAP3K7CLP57077 242 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 STX5Q13190 355 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 C1orf195Q5TG92 126 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 LCN15Q6UWW0 184 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 GPR32P1Q8NGA4 272 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 TMEM106AQ96A25 262 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 OBSCN-AS1Q96MR7 158 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
USP8-218ENST00000561330 GREB1Q4ZG55 1949 aa0.63□□□□□ -2.31
USP8-218ENST00000561330 ALPK2Q86TB3 2170 aa0.62□□□□□ -2.31
USP8-218ENST00000561330 LOC110117498A0A087WWA1 95 aa0.62□□□□□ -2.31
USP8-218ENST00000561330 C8orf88P0DMB2 117 aa0.62□□□□□ -2.31
USP8-218ENST00000561330 BRS3P32247 399 aa0.62□□□□□ -2.31
USP8-218ENST00000561330 MED21Q13503 144 aa0.62□□□□□ -2.31
USP8-218ENST00000561330 DEFB125Q8N687 156 aa0.62□□□□□ -2.31
USP8-218ENST00000561330 CNBD2Q96M20 576 aa0.62□□□□□ -2.31
USP8-218ENST00000561330 ABCC11Q96J66 1382 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
USP8-218ENST00000561330 UCHL3P15374 230 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 MYL12AP19105 171 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 MARCKSL1P49006 195 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 BLVRAP53004 296 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 CCL20P78556 96 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 MLLT11Q13015 90 aaPredicted RBP0.61□□□□□ -2.31
USP8-218ENST00000561330 COQ5Q5HYK3 327 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 ZNF826PQ6ZT77 177 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 FAM9CQ8IZT9 166 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 LINC00526Q96FQ7 95 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 CKLFQ9UBR5 152 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 C3orf18Q9UK00 162 aa0.61□□□□□ -2.31
USP8-218ENST00000561330 NCOA6Q14686 2063 aaPredicted RBP0.61□□□□□ -2.31
USP8-218ENST00000561330 TRBV20OR9-2A0A075B6H5 130 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 C19orf84I3L1E1 186 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 APOEP02649 317 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 COX5BP10606 129 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 KISS1Q15726 138 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 MCFD2Q8NI22 146 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 RASSF5Q8WWW0 418 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 KLK9Q9UKQ9 250 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 STRCQ7RTU9 1775 aa0.6□□□□□ -2.31
USP8-218ENST00000561330 DCCP43146 1447 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 A0A0J9YY10 115 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 A0A1B0GX78 115 aa0.59□□□□□ -2.31
USP8-218ENST00000561330 FADS1O60427 444 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms