RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 SURF2Q15527 256 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-210ENST00000561277 CTRB2Q6GPI1 263 aa15.34■□□□□ 0.05
TSPAN3-210ENST00000561277 ZNF343Q6P1L6 599 aa15.34■□□□□ 0.05
TSPAN3-210ENST00000561277 NECAP1Q8NC96 275 aa15.34■□□□□ 0.05
TSPAN3-210ENST00000561277 OR1L8Q8NGR8 309 aa15.34■□□□□ 0.05
TSPAN3-210ENST00000561277 C5orf66Q9H5L9 145 aa15.34■□□□□ 0.05
TSPAN3-210ENST00000561277 PRNDQ9UKY0 176 aa15.34■□□□□ 0.05
TSPAN3-210ENST00000561277 TEX13DA0A0J9YY54 714 aaPredicted RBP15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 DBX1A6NMT0 343 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 DHFRP00374 187 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 TRBV12-3P01733 135 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 CRYGCP07315 174 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 TRAPPC2P0DI81 140 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 TRAPPC2BP0DI82 140 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 FAUP35544 74 aaKnown RBP15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 ETV6P41212 452 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 KRTAP10-11P60412 298 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 ATP5G2Q06055 141 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 C15orf32Q32M92 178 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 C9orf66Q5T8R8 295 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 FBXL7Q9UJT9 491 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 GPR132Q9UNW8 380 aa15.33■□□□□ 0.05
TSPAN3-210ENST00000561277 C15orf61A6NNL5 157 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 AKR1C2P52895 323 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 IZUMO4Q1ZYL8 232 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 CADM3Q8N126 398 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 FANCD2OSQ96PS1 177 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 SRRQ9GZT4 340 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 PEF1Q9UBV8 284 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 PRKDCP78527 4128 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 IGKV1-5P01602 117 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 OR5AC1P0C628 307 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 THOC7Q6I9Y2 204 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 OR4A16Q8NH70 328 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 SRSF8Q9BRL6 282 aaKnown RBP15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 NAA60Q9H7X0 242 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 NDUFA4L2Q9NRX3 87 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 TMEM14BQ9NUH8 114 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 FKBP11Q9NYL4 201 aa15.32■□□□□ 0.04
TSPAN3-210ENST00000561277 DNAH3Q8TD57 4116 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 OR13C7P0DN81 318 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 ZP3P21754 424 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 UCP1P25874 307 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 MECP2P51608 486 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 WT1-ASQ06250 92 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 EGFEM1PQ0D2K5 195 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 ZNF57Q68EA5 555 aaPredicted RBP15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 REC114Q7Z4M0 266 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 GDPD1Q8N9F7 314 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 OR5B3Q8NH48 314 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 LSM10Q969L4 123 aaKnown RBP15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 S4R3C0 116 aa15.31■□□□□ 0.04
TSPAN3-210ENST00000561277 SAP30O75446 220 aa15.3■□□□□ 0.04
TSPAN3-210ENST00000561277 NDUFB8O95169 186 aa15.3■□□□□ 0.04
TSPAN3-210ENST00000561277 IGHV3-23P01764 117 aa15.3■□□□□ 0.04
TSPAN3-210ENST00000561277 RNASE11Q8TAA1 199 aaKnown RBP15.3■□□□□ 0.04
TSPAN3-210ENST00000561277 IGLV11-55A0A075B6I3 123 aa15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 CRYM-AS1A6NIL9 109 aa15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 B3GALNT1O75752 331 aa15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 ATG12O94817 140 aa15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 HIST1H1BP16401 226 aaKnown RBP15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 HSD17B13Q7Z5P4 300 aaPredicted RBP15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 MRAPQ8TCY5 172 aa15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 SCGB3A2Q96PL1 93 aa15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 TMEM222Q9H0R3 208 aa15.29■□□□□ 0.04
TSPAN3-210ENST00000561277 INPP1P49441 399 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 RPEL1Q2QD12 228 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 TRIQKQ629K1 86 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 TMEM230Q96A57 120 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 TMEM56Q96MV1 263 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 AKR1C4P17516 323 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 SYNJ2BPP57105 145 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 BAK1Q16611 211 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 SGPP2Q8IWX5 399 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 LHFPL5Q8TAF8 219 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 GLYATL2Q8WU03 294 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 RRNAD1Q96FB5 475 aaKnown RBP15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 DMRT1Q9Y5R6 373 aa15.28■□□□□ 0.04
TSPAN3-210ENST00000561277 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 A0A0G2JRQ6 117 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 WI2-2373I1.2A0A1W2PRP0 233 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 MFSD2BA6NFX1 497 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 PPP5D1E7EU14 171 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 BMPR1BO00238 502 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 P0C879 139 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 SPINK9Q5DT21 86 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 ACSM6Q6P461 480 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 EEF1AKMT3Q96AZ1 226 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 PRR13Q9NZ81 148 aa15.27■□□□□ 0.03
TSPAN3-210ENST00000561277 CDS2O95674 445 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 INSL3P51460 131 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 DHODHQ02127 395 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 KLF5Q13887 457 aaPredicted RBP15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 KLK9Q2XQG4 91 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 TMEM268Q5VZI3 342 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 SLC25A24Q6NUK1 477 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 CLEC19AQ6UXS0 136 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 TMED4Q7Z7H5 227 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 ZNF429Q86V71 674 aa15.26■□□□□ 0.03
TSPAN3-210ENST00000561277 RBPMSQ93062 196 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms