RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 QTRT1Q9BXR0 403 aaKnown RBP7.49□□□□□ -1.21
RABGGTA-221ENST00000561055 SHPKQ9UHJ6 478 aa7.49□□□□□ -1.21
RABGGTA-221ENST00000561055 A0A0B4J293 547 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 A0A0G2JRQ6 117 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 HMX3A6NHT5 357 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 DBX1A6NMT0 343 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 I3L521 148 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 SFT2D2O95562 160 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 TSPAN15O95858 294 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 OR4E1P0C645 316 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 MYOD1P15172 320 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 PSMB6P28072 239 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 AKR1C2P52895 323 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 HSPE1P61604 102 aaKnown RBP7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 PPP1R1AQ13522 171 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 NSUN5P1Q3KNT7 163 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 PDLIM3Q53GG5 364 aaPredicted RBP7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 NMSQ5H8A3 153 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 TMEM268Q5VZI3 342 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 HIST2H2BDQ6DRA6 164 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 MZT2BQ6NZ67 158 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 Q6ZRM9 215 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 LCNL1Q6ZST4 164 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 LGI3Q8N145 548 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 DUSP18Q8NEJ0 188 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 OR4A16Q8NH70 328 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 C4orf3Q8WVX3 66 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 RRNAD1Q96FB5 475 aaKnown RBP7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 FYTTD1Q96QD9 318 aaKnown RBP7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 COA4Q9NYJ1 87 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 CACFD1Q9UGQ2 172 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 NSG2Q9Y328 171 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 OR51B2Q9Y5P1 312 aa7.48□□□□□ -1.21
RABGGTA-221ENST00000561055 A0A0G2JLM5 398 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 FAM240BA0A1B0GVZ2 78 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 C9orf170A2RU37 121 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 FAM223BA6NKX1 122 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 TRGV3P03979 118 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 SLC25A6P12236 298 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 AREGP15514 252 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 MYCNOSP40205 109 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 PRCDQ00LT1 54 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 FHL3Q13643 280 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 IZUMO4Q1ZYL8 232 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 TREML4Q6UXN2 200 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 ETV3LQ6ZN32 361 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 FAM223AQ8IWN6 122 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 SLC35G3Q8N808 338 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 NECAP1Q8NC96 275 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 WFDC9Q8NEX5 89 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 OR52E5Q8NH55 327 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 GPR146Q96CH1 333 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 P2RX4Q99571 388 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 C20orf85Q9H1P6 137 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 FLVCR2Q9UPI3 526 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 CMYA5Q8N3K9 4069 aa7.47□□□□□ -1.21
RABGGTA-221ENST00000561055 A0A1B0GU03 582 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 ST8SIA3O43173 380 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 RBMXL2O75526 392 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 DUS4LO95620 317 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 DHFRP00374 187 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 APELAP0DMC3 54 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 HIST1H1BP16401 226 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 VAMP1P23763 118 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 TPPP2P59282 170 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 WT1-ASQ06250 92 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 DHRS2Q13268 280 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 ANKRD55Q3KP44 614 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 KHDC1LQ5JSQ8 128 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 ZNF343Q6P1L6 599 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 C18orf65Q6ZTR6 163 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 C8orf86Q6ZUL3 223 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 LYZL2Q7Z4W2 148 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 LYG2Q86SG7 212 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 OR2C3Q8N628 320 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 ZNF114Q8NC26 417 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 KLHL30-AS1Q8NEE0 82 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 OR10W1Q8NGF6 305 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 OR1L6Q8NGR2 347 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 MS4A10Q96PG2 267 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 GNB4Q9HAV0 340 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 PRR13Q9NZ81 148 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 TMED3Q9Y3Q3 217 aa7.46□□□□□ -1.22
RABGGTA-221ENST00000561055 IGLV11-55A0A075B6I3 123 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 A0A1W2PRX2 142 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 NUDT19A8MXV4 375 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 CCL24O00175 119 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 PITX3O75364 302 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 HLA-AP01891 365 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 SULT1A3P0DMM9 295 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 SULT1A4P0DMN0 295 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 OR13C7P0DN81 318 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 ANXA7P20073 488 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 RAB25P57735 213 aa7.45□□□□□ -1.22
RABGGTA-221ENST00000561055 DEFA1P59665 94 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms