RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OR2J3O76001 311 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 REG1AP05451 166 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 UCP1P25874 307 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 SP6Q3SY56 376 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 CCDC71LQ8N9Z2 235 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 NECAP1Q8NC96 275 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 OR1L8Q8NGR8 309 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 SDHCQ99643 169 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 GPR61Q9BZJ8 451 aa11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 RANGRFQ9HD47 186 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 AURKAIP1Q9NWT8 199 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-213ENST00000560856 IGLV11-55A0A075B6I3 123 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 ANKRD34BA5PLL1 514 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 C15orf61A6NNL5 157 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 SEC14L6B5MCN3 397 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 OVOL1O14753 267 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 SNAPC5O75971 98 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 NDUFB8O95169 186 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 SERPINE2P07093 398 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 TRAPPC2P0DI81 140 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 TRAPPC2BP0DI82 140 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 ATP5G2Q06055 141 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 WT1-ASQ06250 92 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 IZUMO4Q1ZYL8 232 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 SPANXN2Q5MJ10 180 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 GLYATL2Q8WU03 294 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 TMEM230Q96A57 120 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 PEF1Q9UBV8 284 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 PRNDQ9UKY0 176 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 OR51B2Q9Y5P1 312 aa11.72□□□□□ -0.53
SNRPA1-213ENST00000560856 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 CRYM-AS1A6NIL9 109 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 EXOSC2Q13868 293 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 KLF5Q13887 457 aaPredicted RBP11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 C15orf32Q32M92 178 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 THOC7Q6I9Y2 204 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 H2BFWTQ7Z2G1 175 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 LHFPL5Q8TAF8 219 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 TMEM222Q9H0R3 208 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 NAA60Q9H7X0 242 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 SCP2D1Q9UJQ7 156 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 FBXL7Q9UJT9 491 aa11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 C14orf166Q9Y224 244 aaKnown RBP11.71□□□□□ -0.53
SNRPA1-213ENST00000560856 TGP01266 2768 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 A0A0B4J293 547 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 TEX13DA0A0J9YY54 714 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 A6NHS1 94 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 B3GALNT1O75752 331 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 CDS2O95674 445 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 OR5AC1P0C628 307 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 OR13C7P0DN81 318 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 MFAP2P55001 183 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 BAK1Q16611 211 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 ACSM6Q6P461 480 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 REC114Q7Z4M0 266 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 OR5B3Q8NH48 314 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 DEDD2Q8WXF8 326 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 MCUBQ9NWR8 336 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 FKBP11Q9NYL4 201 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 SORL1Q92673 2214 aa11.7□□□□□ -0.54
SNRPA1-213ENST00000560856 WI2-2373I1.2A0A1W2PRP0 233 aa11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 BMPR1BO00238 502 aa11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 HIST1H1BP16401 226 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 ZP3P21754 424 aa11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 AP3S2P59780 193 aa11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 HSD17B13Q7Z5P4 300 aaPredicted RBP11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 GALNT14Q96FL9 552 aa11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 CCDC140Q96MF4 163 aa11.69□□□□□ -0.54
SNRPA1-213ENST00000560856 K7EIL1 84 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 DHFRP00374 187 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 INSL3P51460 131 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 HSPE1P61604 102 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 SUPT4H1P63272 117 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 TMEM187Q14656 261 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 IL34Q6ZMJ4 242 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 Q6ZRM9 215 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 ZNF429Q86V71 674 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 SELENOHQ8IZQ5 122 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 OR4A16Q8NH70 328 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 TMEM56Q96MV1 263 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 HINT2Q9BX68 163 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 TMEM56-RWDD3S4R434 201 aa11.68□□□□□ -0.54
SNRPA1-213ENST00000560856 MFSD2BA6NFX1 497 aa11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 DEFA4P12838 97 aa11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 FAUP35544 74 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 PRCDQ00LT1 54 aa11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 DHODHQ02127 395 aa11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 OR2C3Q8N628 320 aa11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 F11RQ9Y624 299 aaKnown RBP11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 S4R3C0 116 aa11.67□□□□□ -0.54
SNRPA1-213ENST00000560856 IGHV3-23P01764 117 aa11.66□□□□□ -0.54
SNRPA1-213ENST00000560856 AKR1C2P52895 323 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms