RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 EGFEM1PQ0D2K5 195 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 H2BFWTQ7Z2G1 175 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 OR1L8Q8NGR8 309 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 PRRT1Q99946 306 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 QTRT1Q9BXR0 403 aaKnown RBP9.29□□□□□ -0.92
USP8-212ENST00000560730 SRRQ9GZT4 340 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 NDUFA4L2Q9NRX3 87 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 TMEM14BQ9NUH8 114 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 MCUBQ9NWR8 336 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 FBXL7Q9UJT9 491 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 C14orf166Q9Y224 244 aaKnown RBP9.29□□□□□ -0.92
USP8-212ENST00000560730 OR51B2Q9Y5P1 312 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 DMRT1Q9Y5R6 373 aa9.29□□□□□ -0.92
USP8-212ENST00000560730 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 P0C879 139 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 TRAPPC2P0DI81 140 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 TRAPPC2BP0DI82 140 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 ECI1P42126 302 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 WT1-ASQ06250 92 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 EXOSC2Q13868 293 aaKnown RBP9.28□□□□□ -0.92
USP8-212ENST00000560730 SURF2Q15527 256 aaPredicted RBP9.28□□□□□ -0.92
USP8-212ENST00000560730 C15orf32Q32M92 178 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 SPANXN2Q5MJ10 180 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 TOMM5Q8N4H5 51 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 GDPD1Q8N9F7 314 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 NECAP1Q8NC96 275 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 TMEM230Q96A57 120 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 SDHCQ99643 169 aaPredicted RBP9.28□□□□□ -0.92
USP8-212ENST00000560730 HINT2Q9BX68 163 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 RANGRFQ9HD47 186 aaPredicted RBP9.28□□□□□ -0.92
USP8-212ENST00000560730 PEF1Q9UBV8 284 aaKnown RBP9.28□□□□□ -0.92
USP8-212ENST00000560730 SCP2D1Q9UJQ7 156 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 PRNDQ9UKY0 176 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 S4R3C0 116 aa9.28□□□□□ -0.92
USP8-212ENST00000560730 IGLV11-55A0A075B6I3 123 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 A0A0G2JRQ6 117 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 TEX13DA0A0J9YY54 714 aaPredicted RBP9.27□□□□□ -0.93
USP8-212ENST00000560730 C15orf61A6NNL5 157 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 IGHV3-23P01764 117 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 OR5AC1P0C628 307 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 OR13C7P0DN81 318 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 UCP1P25874 307 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 BAK1Q16611 211 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 KLK9Q2XQG4 91 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 C9orf66Q5T8R8 295 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 LHFPL5Q8TAF8 219 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 GPR61Q9BZJ8 451 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 NAA60Q9H7X0 242 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 KLK9Q9UKQ9 250 aa9.27□□□□□ -0.93
USP8-212ENST00000560730 A0A0B4J293 547 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 WI2-2373I1.2A0A1W2PRP0 233 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 CRYM-AS1A6NIL9 109 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 BMPR1BO00238 502 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 DEFA4P12838 97 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 MFAP2P55001 183 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 KLF5Q13887 457 aaPredicted RBP9.26□□□□□ -0.93
USP8-212ENST00000560730 TRIM16LQ309B1 348 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 ACSM6Q6P461 480 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 OR4A16Q8NH70 328 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 TSC22D3Q99576 134 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 SRSF8Q9BRL6 282 aaKnown RBP9.26□□□□□ -0.93
USP8-212ENST00000560730 TMEM222Q9H0R3 208 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 TGP01266 2768 aa9.26□□□□□ -0.93
USP8-212ENST00000560730 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.25□□□□□ -0.93
USP8-212ENST00000560730 MFSD2BA6NFX1 497 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 PPP5D1E7EU14 171 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 K7EIL1 84 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 CDS2O95674 445 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 ZP3P21754 424 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 SYNJ2BPP57105 145 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 AP3S2P59780 193 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 SPINK9Q5DT21 86 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 ZNF57Q68EA5 555 aaPredicted RBP9.25□□□□□ -0.93
USP8-212ENST00000560730 Q6ZRM9 215 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 SELENOHQ8IZQ5 122 aaKnown RBP9.25□□□□□ -0.93
USP8-212ENST00000560730 OR5B3Q8NH48 314 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 LSM10Q969L4 123 aaKnown RBP9.25□□□□□ -0.93
USP8-212ENST00000560730 CCDC140Q96MF4 163 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 FKBP11Q9NYL4 201 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 PRR13Q9NZ81 148 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 DNAH3Q8TD57 4116 aa9.25□□□□□ -0.93
USP8-212ENST00000560730 A6NHS1 94 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 SAP30O75446 220 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 B3GALNT1O75752 331 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 DHFRP00374 187 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 HLA-AP01891 365 aaKnown RBP9.24□□□□□ -0.93
USP8-212ENST00000560730 HIST1H1BP16401 226 aaKnown RBP9.24□□□□□ -0.93
USP8-212ENST00000560730 AKR1C4P17516 323 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 FAUP35544 74 aaKnown RBP9.24□□□□□ -0.93
USP8-212ENST00000560730 AKR1C2P52895 323 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 HSPE1P61604 102 aaKnown RBP9.24□□□□□ -0.93
USP8-212ENST00000560730 SUPT4H1P63272 117 aaKnown RBP9.24□□□□□ -0.93
USP8-212ENST00000560730 THOC7Q6I9Y2 204 aaKnown RBP9.24□□□□□ -0.93
USP8-212ENST00000560730 CLEC19AQ6UXS0 136 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 IL34Q6ZMJ4 242 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 REC114Q7Z4M0 266 aa9.24□□□□□ -0.93
USP8-212ENST00000560730 MRAPQ8TCY5 172 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms