RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NEUROG1Q92886 237 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 BANF2Q9H503 90 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 GNB4Q9HAV0 340 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 NPVFQ9HCQ7 196 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 PLEKHJ1Q9NW61 149 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 HEBP2Q9Y5Z4 205 aa5.54□□□□□ -1.52
TSPAN3-209ENST00000560715 IGKV1D-8A0A087WSZ0 117 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 FAM231BA6NCW3 169 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 LCE2BO14633 110 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF324O75467 553 aaPredicted RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 CA2P00918 260 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 STATHP02808 62 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 GUCA1AP43080 201 aaPredicted RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SERF2P84101 59 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 IGFBP7Q16270 282 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 HLA-DRB5Q30154 266 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 OR10J3Q5JRS4 329 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 TSPO2Q5TGU0 170 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 ATG4DQ86TL0 474 aaPredicted RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 MTURNQ8N3F0 131 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 IGFBPL1Q8WX77 278 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 NRTNQ99748 197 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 ATG2BQ96BY7 2078 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 REV3LO60673 3130 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 IGKV1D-42A0A075B6H8 117 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 FOXI3A8MTJ6 420 aaPredicted RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 CNIH1O95406 144 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 MRPS21P82921 87 aaKnown RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 GAGE2BQ13066 116 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 RAB31Q13636 194 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 GAGE2EQ4V326 116 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 GAGE2AQ6NT46 116 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 OR5D14Q8NGL3 314 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 OR2A1Q8NGT9 310 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 OR52N5Q8NH56 324 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SCGB1C1Q8TD33 95 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 BORCS7Q96B45 105 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 ADAT3Q96EY9 351 aaPredicted RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 GMPPAQ96IJ6 420 aaPredicted RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SPIN2AQ99865 258 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SPIN2BQ9BPZ2 258 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 DERL1Q9BUN8 251 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 GAGE2DQ9UEU5 116 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SCN2AQ99250 2005 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 PHF1O43189 567 aaPredicted RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SPRY3O43610 288 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 LINC00869P0C866 280 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF20P17024 532 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 TIMP3P35625 211 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 PLA2G5P39877 138 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 DAP3P51398 398 aaKnown RBP5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 PSG4Q00888 419 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 HSD52Q0P140 79 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 COX19Q49B96 90 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 FHL5Q5TD97 284 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 TPRX1Q8N7U7 411 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SUMF1Q8NBK3 374 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 ZNF721Q8TF20 911 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 MRAP2Q96G30 205 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 CLEC7AQ9BXN2 247 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 LIME1Q9H400 295 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 FAM60AQ9NP50 221 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 THYN1Q9P016 225 aa5.53□□□□□ -1.52
TSPAN3-209ENST00000560715 SPTBP11277 2137 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 COL6A3P12111 3177 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 TRBV9A0A0B4J1U6 114 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 IGKV1-8A0A0C4DH67 115 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 MPPED1O15442 326 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 FOXS1O43638 330 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 TNFP01375 233 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 TTRP02766 147 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 ASAH2BP0C7U1 165 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 THBS3P49746 956 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 RPL18Q07020 188 aaKnown RBP5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 ODF3L2Q3SX64 289 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 DEFB123Q8N688 67 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 WDR61Q9GZS3 305 aaKnown RBP5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 ST20Q9HBF5 79 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 TPSG1Q9NRR2 321 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 SLC39A9Q9NUM3 307 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 TAAR3PQ9P1P4 343 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 LOC101059948A0A1B0GTJ6 334 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 K7EP34 96 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 OXTP01178 125 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 SLC35E2P0CK97 266 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 OR3A4PP47883 348 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 FUT6P51993 359 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 RPS18P62269 152 aaKnown RBP5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 ZNF141Q15928 474 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 SRSF7Q16629 238 aaKnown RBP eCLIP5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 HLA-BQ31612 363 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 LCN12Q6JVE5 192 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 OR51T1Q8NGJ9 327 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 OR2AE1Q8NHA4 323 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 C11orf45Q8TAV5 145 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 RPEQ96AT9 228 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 RITA1Q96K30 269 aa5.52□□□□□ -1.53
TSPAN3-209ENST00000560715 FANCMQ8IYD8 2048 aa5.51□□□□□ -1.53
TSPAN3-209ENST00000560715 LRP4O75096 1905 aa5.51□□□□□ -1.53
TSPAN3-209ENST00000560715 A0A0G2JMM0 328 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms