RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 GPR183P32249 361 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 RTN4RL2Q86UN3 420 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 LAMB2P55268 1798 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 C9JCJ5 164 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 M0R381 172 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 IGFBP2P18065 325 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 C1QL2Q7Z5L3 287 aa11.17□□□□□ -0.62
CSPG4P11-201ENST00000560634 SLC17A3O00476 420 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 LY6EQ16553 131 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 ZNF324BQ6AW86 544 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 TMEM106BQ9NUM4 274 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 RNF222A6NCQ9 220 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 TMEM144Q7Z5S9 345 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 DCTN5Q9BTE1 182 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 TMEM74BQ9NUR3 256 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 FBLN5Q9UBX5 448 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 SPCS1Q9Y6A9 102 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 KBTBD11-OT1A0A1B0GTJ5 212 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 PSMB11A5LHX3 300 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 PPP1R32Q7Z5V6 425 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 C5orf30Q96GV9 206 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 RTBDNQ9BSG5 229 aaPredicted RBP11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 FBXL7Q9UJT9 491 aa11.16□□□□□ -0.62
CSPG4P11-201ENST00000560634 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 IGKV3OR2-268A0A0C4DH90 116 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 ZNF525Q8N782 197 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 LINC00469Q8N7U9 141 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 NUP37Q8NFH4 326 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 FOXC2Q99958 501 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 C1QTNF5Q9BXJ0 243 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 IGHV3-35A0A0C4DH35 117 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 C17orf98A8MV24 154 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 NDUFAF3Q9BU61 184 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 SCO2A0A1W2PP80 73 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 PAX1P15863 534 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 ZXDCQ2QGD7 858 aaPredicted RBP11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 FER1L6-AS1Q8NA97 138 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 SEMA5BQ9P283 1151 aa11.15□□□□□ -0.62
CSPG4P11-201ENST00000560634 A0A1W2PR77 199 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 NUDT11Q96G61 164 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 FBXL15Q9H469 300 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 CEP250Q9BV73 2442 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 TMEM262E9PQX1 116 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 CCL20P78556 96 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 TYMSP04818 313 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 PLAURQ03405 335 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 TGIF1Q15583 401 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 TFF3Q07654 80 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 IMMP2LQ96T52 175 aa11.14□□□□□ -0.63
CSPG4P11-201ENST00000560634 ZNF418Q8TF45 676 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 GTF3AQ92664 365 aaKnown RBP11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 DPH3Q96FX2 82 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 ASCL2Q99929 193 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 CHCHD2Q9Y6H1 151 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 LOC105371267A0A1B0GV96 52 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 CECR9P0C854 216 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 ATP5G3P48201 142 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 RPL23P62829 140 aaKnown RBP11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 ZNF703Q9H7S9 590 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 FOXA2Q9Y261 457 aaPredicted RBP11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 LAMTOR2Q9Y2Q5 125 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 EFEMP2O95967 443 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 GDF15Q99988 308 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 OTORQ9NRC9 128 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 LINC00312Q9Y6C7 94 aa11.13□□□□□ -0.63
CSPG4P11-201ENST00000560634 IGHV3OR16-13A0A075B7E8 117 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 IGHV3-74A0A0B4J1X5 117 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 CNTFRP26992 372 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 ZNF362Q5T0B9 420 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 OR13A1Q8NGR1 328 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 MBD3L1Q8WWY6 194 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 NRN1Q9NPD7 142 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 A0A1B0GTI1 187 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 TMEM50AO95807 157 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 IGKV3-20P01619 116 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 CACNG7P62955 275 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 CLDN16Q9Y5I7 305 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 TRBV6-7A0A0A0MS04 114 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 RBMY1BA6NDE4 496 aaKnown RBP11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 RBMY1EA6NEQ0 496 aaKnown RBP11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 PPBPP02775 128 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 CTSBP07858 339 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 RBMY1DP0C7P1 496 aaKnown RBP11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 RBMY1A1P0DJD3 496 aaKnown RBP11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 RBMY1CP0DJD4 496 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 IGFBP3P17936 291 aaPredicted RBP11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 LINC00114Q6XXX2 140 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 PPP1R27Q86WC6 154 aa11.12□□□□□ -0.63
CSPG4P11-201ENST00000560634 NUDT10Q8NFP7 164 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms