RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 PDZD9Q8IXQ8 264 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 LGI3Q8N145 548 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 SLC35G3Q8N808 338 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 MAPKAPK5-AS1Q8N8E1 139 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 INO80EQ8NBZ0 244 aaPredicted RBP3.52□□□□□ -1.85
TMOD3-207ENST00000560549 OR4A4PQ8NGN8 299 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 STOML3Q8TAV4 291 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 RAB1CQ92928 201 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 LHX4Q969G2 390 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 GPR146Q96CH1 333 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM56Q96MV1 263 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 SUCNR1Q9BXA5 334 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 SMIM3Q9BZL3 60 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 SHARPINQ9H0F6 387 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM222Q9H0R3 208 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 NARFLQ9H6Q4 476 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 GNG12Q9UBI6 72 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 RCL1Q9Y2P8 373 aaKnown RBP3.52□□□□□ -1.85
TMOD3-207ENST00000560549 KCNIP3Q9Y2W7 256 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 MEMO1Q9Y316 297 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 WIPI2Q9Y4P8 454 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 LSM5Q9Y4Y9 91 aaKnown RBP3.52□□□□□ -1.85
TMOD3-207ENST00000560549 RFNGQ9Y644 331 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 TMEM56-RWDD3S4R434 201 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 NBASA2RRP1 2371 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 ESPL1Q14674 2120 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 ZGRF1Q86YA3 2104 aa3.52□□□□□ -1.85
TMOD3-207ENST00000560549 SHANK1Q9Y566 2161 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 IGKV1D-17A0A075B6S4 117 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 IGHV3OR15-7A0A075B7D8 119 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 KIR2DS1A0A191URI9 304 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 A0A1W2PPV4 95 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 IGSF23A1L1A6 192 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 FAM24AA6NFZ4 105 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 FBLL1A6NHQ2 334 aaKnown RBP3.51□□□□□ -1.85
TMOD3-207ENST00000560549 C12orf77C9JDV5 145 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ATP6V1G2-DDX39BF2Z307 99 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 BMPR1BO00238 502 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 CDS2O95674 445 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 IFNA21P01568 189 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 IGLV2-11P01706 119 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 S100A6P06703 90 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 CTXN2P0C2S0 81 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 RPL12P30050 165 aaKnown RBP3.51□□□□□ -1.85
TMOD3-207ENST00000560549 KIR2DS4P43632 304 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 AESQ08117 197 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ARL16Q0P5N6 197 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 EIF4EBP1Q13541 118 aaPredicted RBP3.51□□□□□ -1.85
TMOD3-207ENST00000560549 KLF5Q13887 457 aaPredicted RBP3.51□□□□□ -1.85
TMOD3-207ENST00000560549 KIR2DS1Q14954 304 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 NMSQ5H8A3 153 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 TIMM23BQ5SRD1 257 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 GFI1BQ5VTD9 330 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 THOC7Q6I9Y2 204 aaKnown RBP3.51□□□□□ -1.85
TMOD3-207ENST00000560549 TGIF2LYQ8IUE0 185 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 Q8IYB0 196 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 TPRX1Q8N7U7 411 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF565Q8N9K5 539 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 CCDC71LQ8N9Z2 235 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 OR2Z1Q8NG97 314 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 OR10V1Q8NGI7 309 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 OR1S2Q8NGQ3 325 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 OR10J5Q8NHC4 309 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ANGPTL6Q8NI99 470 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 LRRC29Q8WV35 223 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 IL1F10Q8WWZ1 152 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 NRGNQ92686 78 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 BCL2L14Q9BZR8 327 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ARV1Q9H2C2 271 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 RHOFQ9HBH0 211 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 TAF9BQ9HBM6 251 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 TREM2Q9NZC2 230 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 TAAR3PQ9P1P4 343 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 TRAPPC2LQ9UL33 140 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 PPP1R3CQ9UQK1 317 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF835Q9Y2P0 537 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 POLDIP2Q9Y2S7 368 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 RP1L1Q8IWN7 2480 aaPredicted RBP3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ADGRG4Q8IZF6 3080 aa3.51□□□□□ -1.85
TMOD3-207ENST00000560549 ARHGAP21Q5T5U3 1957 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 NIPBLQ6KC79 2804 aaeCLIP3.5□□□□□ -1.85
TMOD3-207ENST00000560549 BOD1L1Q8NFC6 3051 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 IGLV5-45A0A087WSX0 123 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 A0A1B0GW55 424 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 DPRXA6NFQ7 191 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 PITX3O75364 302 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF737O75373 536 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 LHBP01229 141 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 IGKV1-5P01602 117 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 IGHV3-13P01766 116 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 IGHV4-39P01824 125 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 HBZP02008 142 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 IGF1P05019 195 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 OR8U9P0C7N5 309 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 DUX4L2P0CJ85 424 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 DUX4L3P0CJ86 424 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 DUX4L4P0CJ87 422 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 DUX4L5P0CJ88 424 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 DUX4L6P0CJ89 424 aa3.5□□□□□ -1.85
TMOD3-207ENST00000560549 DUX4L7P0CJ90 424 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms