RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 MT-ND2P03891 347 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 MRPL3P09001 348 aaKnown RBP4.3□□□□□ -1.72
HERC1-208ENST00000560462 APELAP0DMC3 54 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 GZMHP20718 246 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 SLC2A5P22732 501 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 DAD1P61803 113 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 SRSF9Q13242 221 aaKnown RBP eCLIP4.3□□□□□ -1.72
HERC1-208ENST00000560462 FLOT2Q14254 428 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 GINS1Q14691 196 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 PSG5Q15238 335 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 SLC25A30Q5SVS4 291 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 TMEM236Q5W0B7 351 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 LEMD1Q68G75 181 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 ZNF773Q6PK81 442 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 SPATA24Q86W54 205 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 ZNF679Q8IYX0 411 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 OR51E1Q8TCB6 317 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 PHYHIPQ92561 330 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 ARL11Q969Q4 196 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 MRPL53Q96EL3 112 aaKnown RBP4.3□□□□□ -1.72
HERC1-208ENST00000560462 UHRF2Q96PU4 802 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 SULT4A1Q9BR01 284 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 THTPAQ9BU02 230 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 FUNDC2Q9BWH2 189 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 COMMD4Q9H0A8 199 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 ZNF556Q9HAH1 456 aa4.3□□□□□ -1.72
HERC1-208ENST00000560462 SMPD3Q9NY59 655 aaPredicted RBP4.3□□□□□ -1.72
HERC1-208ENST00000560462 ELF5Q9UKW6 265 aaPredicted RBP4.3□□□□□ -1.72
HERC1-208ENST00000560462 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 CCDC182A6NF36 153 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 A6NIN4 97 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 M0R129 80 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 SULT1B1O43704 296 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 FKBP6O75344 327 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 HMGN1P05114 100 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 OR9G9P0C7N8 305 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 ANXA8P13928 327 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 HOXB6P17509 224 aaKnown RBP4.29□□□□□ -1.72
HERC1-208ENST00000560462 ALOX5APP20292 161 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 PRKACGP22612 351 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 HCCSP53701 268 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 CDK5Q00535 292 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 DNAL1Q4LDG9 190 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 PAN3Q58A45 887 aaKnown RBP4.29□□□□□ -1.72
HERC1-208ENST00000560462 RSBN1Q5VWQ0 802 aaPredicted RBP4.29□□□□□ -1.72
HERC1-208ENST00000560462 Q6P435 159 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 TRPT1Q86TN4 253 aaKnown RBP4.29□□□□□ -1.72
HERC1-208ENST00000560462 GIMAP1Q8WWP7 306 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 TEAD3Q99594 435 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 PHB2Q99623 299 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 CHAC1Q9BUX1 264 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 GNG12Q9UBI6 72 aa4.29□□□□□ -1.72
HERC1-208ENST00000560462 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 TMEM269A0A1B0GVZ9 245 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 TCRBV3S1A0A5B6 114 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 H3BNX3 289 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 C15orf65H3BRN8 121 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 H7C2Y5 167 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 GYG2O15488 501 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 RBBP9O75884 186 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 OR2J3O76001 311 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 FADS2O95864 444 aaKnown RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 IGLV3-1P01715 115 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 IGHV3-23P01764 117 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 GSTT2P0CG29 244 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 GSTT2BP0CG30 244 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 MAS1LP35410 378 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 ALDH3B2P48448 385 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 RIDAP52758 137 aaKnown RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 DEFB131AP59861 70 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 ACOT6Q3I5F7 207 aaPredicted RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 ZNF829Q3KNS6 432 aaPredicted RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 OR10V1Q8NGI7 309 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 DNAJC9Q8WXX5 260 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 TM2D1Q9BX74 207 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 MROQ9BYG7 248 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 PRRG3Q9BZD7 231 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 YIPF3Q9GZM5 350 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 MOB1AQ9H8S9 216 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 DAZ1Q9NQZ3 744 aaKnown RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 TVP23BQ9NYZ1 205 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 NUFIP1Q9UHK0 495 aaKnown RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 IKZF2Q9UKS7 526 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 ING4Q9UNL4 249 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 POMPQ9Y244 141 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 MRPS16Q9Y3D3 137 aaKnown RBP4.28□□□□□ -1.72
HERC1-208ENST00000560462 TMEM14AQ9Y6G1 99 aa4.28□□□□□ -1.72
HERC1-208ENST00000560462 IGKV3-7A0A075B6H7 116 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 ACOD1A6NK06 481 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 F5H768 121 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 H0YJX3 145 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 K7EQM0 130 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 PRKYO43930 277 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 ZNF254O75437 659 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 SRSF10O75494 262 aaKnown RBP4.27□□□□□ -1.73
HERC1-208ENST00000560462 TTRP02766 147 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 GNB3P16520 340 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 DAPP51397 102 aa4.27□□□□□ -1.73
HERC1-208ENST00000560462 CXCR4P61073 352 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms