RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 RNF5Q99942 180 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 COMMD5Q9GZQ3 224 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 ZC4H2Q9NQZ6 224 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 CYTL1Q9NRR1 136 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 NDUFA4L2Q9NRX3 87 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 ZNF257Q9Y2Q1 563 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 C15orf62A8K5M9 175 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 BCL2L11O43521 198 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 SPDEFO95238 335 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 CFDP00746 253 aaPredicted RBP13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 BRS3P32247 399 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 C5orf64Q2M2E5 130 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 Q8N9W7 124 aa13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 ZNF48Q96MX3 618 aaPredicted RBP13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 PAIP2BQ9ULR5 123 aaKnown RBP13.78□□□□□ -0.2
CHRNA3-206ENST00000559658 A0A0D9SG52 128 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 MED6O75586 246 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 REG1AP05451 166 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 FGF2P09038 288 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 FBP1P09467 338 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 RPL23AP62750 156 aaKnown RBP13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 WT1-ASQ06250 92 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 OR5B3Q8NH48 314 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 NANPQ8TBE9 248 aa13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 FAM103A1Q9BTL3 118 aaKnown RBP13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 HEYLQ9NQ87 328 aaPredicted RBP13.77□□□□□ -0.21
CHRNA3-206ENST00000559658 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 COMPP49747 757 aaPredicted RBP13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 CLINT1Q14677 625 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 LRRC75BQ2VPJ9 315 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 TMEM14EPQ6UXP3 125 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 MMD2Q8IY49 270 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 PLEKHA3Q9HB20 300 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 PMS2P5A8MQ11 134 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 CD5LO43866 347 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 AREGP15514 252 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 DYNLT3P51808 116 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 RPL7L1Q6DKI1 246 aaKnown RBP13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 OR1L8Q8NGR8 309 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 ARPC5LQ9BPX5 153 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 HSPB9Q9BQS6 159 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 KIAA1456Q9P272 454 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 FBXO7Q9Y3I1 522 aa13.76□□□□□ -0.21
CHRNA3-206ENST00000559658 HIVEP1P15822 2718 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 KANTRA0A1W2PQU2 76 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 CYSRT1A8MQ03 144 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 TEX22C9J3V5 150 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 IGHV4-59P01825 116 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 TAS2R30P59541 319 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 OR8G2PQ6IF36 304 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 OR5C1Q8NGR4 320 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 MTORP42345 2549 aa13.75□□□□□ -0.21
CHRNA3-206ENST00000559658 IGLC7A0M8Q6 106 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 AMY1AP04745 511 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 RPL27AP46776 148 aaKnown RBP13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 SULT1A1P50225 295 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 ZNF471Q9BX82 626 aaPredicted RBP13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 TNFRSF19Q9NS68 423 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 FKBP11Q9NYL4 201 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 IFNA10P01566 189 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 CIB3Q96Q77 187 aaPredicted RBP13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 YAE1D1Q9NRH1 226 aa13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 STRAPQ9Y3F4 350 aaKnown RBP13.74□□□□□ -0.21
CHRNA3-206ENST00000559658 ACTL6BO94805 426 aa13.73□□□□□ -0.21
CHRNA3-206ENST00000559658 C9orf139Q6ZV77 190 aa13.73□□□□□ -0.21
CHRNA3-206ENST00000559658 C5orf56Q8N8D9 126 aa13.73□□□□□ -0.21
CHRNA3-206ENST00000559658 SLC24A4Q8NFF2 622 aa13.73□□□□□ -0.21
CHRNA3-206ENST00000559658 SLC25A31Q9H0C2 315 aa13.73□□□□□ -0.21
CHRNA3-206ENST00000559658 HIPK2Q9H2X6 1198 aa13.73□□□□□ -0.21
CHRNA3-206ENST00000559658 RFNGQ9Y644 331 aa13.73□□□□□ -0.21
CHRNA3-206ENST00000559658 IGHV7-81A0A0B4J1V7 117 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 A6NDX4 124 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 LINC01548A6NM66 108 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 CX3CL1P78423 397 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 SPNS3Q6ZMD2 512 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 STX12Q86Y82 276 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 SSMEM1Q8WWF3 244 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 RBM14Q96PK6 669 aaKnown RBP13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 ENY2Q9NPA8 101 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 PRSS46E5RG02 174 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 CNIH1O95406 144 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 OR13C7P0DN81 318 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 RNASE2P10153 161 aaKnown RBP13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 FXYD3Q14802 87 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 BSXQ3C1V8 233 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 ST8SIA2Q92186 375 aa13.72□□□□□ -0.21
CHRNA3-206ENST00000559658 FBXO24O75426 580 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 NPY1RP25929 384 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 MFAP2P55001 183 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 BAXQ07812 192 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 TUSC1Q2TAM9 212 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 ASPHD1Q5U4P2 390 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 OR8H1Q8NGG4 311 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.21
CHRNA3-206ENST00000559658 EGR2P11161 476 aaPredicted RBP13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 MAS1LP35410 378 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 IER3P46695 156 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms