RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PIFOQ8TCI5 191 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 PCNPQ8WW12 178 aaKnown RBP13.23□□□□□ -0.29
TPM1-219ENST00000559397 GINS3Q9BRX5 216 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 PRNDQ9UKY0 176 aa13.23□□□□□ -0.29
TPM1-219ENST00000559397 TEP1Q99973 2627 aaKnown RBP13.23□□□□□ -0.29
TPM1-219ENST00000559397 TET2Q6N021 2002 aaPredicted RBP13.22□□□□□ -0.29
TPM1-219ENST00000559397 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 IFNA17P01571 189 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 SAA1P0DJI8 122 aaPredicted RBP13.22□□□□□ -0.29
TPM1-219ENST00000559397 VDAC2P45880 294 aaPredicted RBP13.22□□□□□ -0.29
TPM1-219ENST00000559397 HSPE1P61604 102 aaKnown RBP13.22□□□□□ -0.29
TPM1-219ENST00000559397 TMEM267Q0VDI3 215 aaPredicted RBP13.22□□□□□ -0.29
TPM1-219ENST00000559397 LRRC75BQ2VPJ9 315 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 SPANXN5Q5MJ07 72 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 FAM74A1Q5RGS3 127 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 SIGLECL1Q8N7X8 197 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 OR4C12Q96R67 309 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 SSX3Q99909 188 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 TNCP24821 2201 aa13.22□□□□□ -0.29
TPM1-219ENST00000559397 IGHV3-72A0A0B4J1Y9 119 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 IGLV2-23P01705 113 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 METTL15P1P0C7V9 234 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 FAM157CP0CG43 387 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 ARL16Q0P5N6 197 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 ZNF266Q14584 549 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 EIF5AL1Q6IS14 154 aaKnown RBP13.21□□□□□ -0.29
TPM1-219ENST00000559397 TMEM217Q8N7C4 229 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 ZNF257Q9Y2Q1 563 aa13.21□□□□□ -0.29
TPM1-219ENST00000559397 FGF16O43320 207 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 KBTBD11O94819 623 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 CD1BP29016 333 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 BRS3P32247 399 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 IER3P46695 156 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 LGALS7P47929 136 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 CLINT1Q14677 625 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 OR4A5Q8NH83 315 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 TMEM167AQ8TBQ9 72 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 ATP5SQ99766 215 aa13.21□□□□□ -0.3
TPM1-219ENST00000559397 STRAPQ9Y3F4 350 aaKnown RBP13.21□□□□□ -0.3
TPM1-219ENST00000559397 PMS2P5A8MQ11 134 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 VENTXO95231 258 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 CD24P25063 80 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 RPS16P62249 146 aaKnown RBP13.2□□□□□ -0.3
TPM1-219ENST00000559397 EBI3Q14213 229 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 SPINK9Q5DT21 86 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 THNSL2Q86YJ6 484 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 VSTM2AQ8TAG5 236 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 MED9Q9NWA0 146 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 FKBP11Q9NYL4 201 aa13.2□□□□□ -0.3
TPM1-219ENST00000559397 C15orf62A8K5M9 175 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 DFFBO76075 338 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 IGHV4-59P01825 116 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 SNRNP70P08621 437 aaKnown RBP13.19□□□□□ -0.3
TPM1-219ENST00000559397 FGF2P09038 288 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 SEC11BP0C7V7 166 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 SPP1P10451 314 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 LRRC20Q8TCA0 184 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 RITA1Q96K30 269 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 PLA2G2EQ9NZK7 142 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 OR51B2Q9Y5P1 312 aa13.19□□□□□ -0.3
TPM1-219ENST00000559397 H3BUX3 64 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
TPM1-219ENST00000559397 IGKV1D-33P01593 117 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 IGKV1-33P01594 117 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 HBG1P69891 147 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 HBG2P69892 147 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 OR5B3Q8NH48 314 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 RNF5Q99942 180 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 TEX50A0A1B0GTY4 177 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 FBXO24O75426 580 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 SCAF4O95104 1147 aaKnown RBP13.18□□□□□ -0.3
TPM1-219ENST00000559397 FAM106CPP0CH98 169 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 SULT1A2P50226 295 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 PRCDQ00LT1 54 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 SSMEM1Q8WWF3 244 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 EAF1Q96JC9 268 aaPredicted RBP13.18□□□□□ -0.3
TPM1-219ENST00000559397 CLCC1Q96S66 551 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 TSNAXQ99598 290 aaKnown RBP13.18□□□□□ -0.3
TPM1-219ENST00000559397 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
TPM1-219ENST00000559397 A6NDX4 124 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 CRYGBP07316 175 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 MYOD1P15172 320 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 RPL8P62917 257 aaKnown RBP13.17□□□□□ -0.3
TPM1-219ENST00000559397 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 VMA21Q3ZAQ7 101 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 Q8N6K4 173 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 OR5R1Q8NH85 324 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 CXorf58Q96LI9 332 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
TPM1-219ENST00000559397 ESM1Q9NQ30 184 aa13.17□□□□□ -0.3
TPM1-219ENST00000559397 HEYLQ9NQ87 328 aaPredicted RBP13.17□□□□□ -0.3
TPM1-219ENST00000559397 NIPBLQ6KC79 2804 aaeCLIP13.16□□□□□ -0.3
TPM1-219ENST00000559397 MOSP00540 346 aa13.16□□□□□ -0.3
TPM1-219ENST00000559397 HOXA1P49639 335 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms