RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 AKR1C4P17516 323 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 CTRB1P17538 263 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 PSMB6P28072 239 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 RHOGP84095 191 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 DHODHQ02127 395 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 FHL3Q13643 280 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 IZUMO4Q1ZYL8 232 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 SAMD5Q5TGI4 173 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 CTRB2Q6GPI1 263 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 THOC7Q6I9Y2 204 aaKnown RBP9.56□□□□□ -0.88
SMAD3-205ENST00000558428 C19orf35Q6ZS72 473 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 TMED4Q7Z7H5 227 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 RNASE11Q8TAA1 199 aaKnown RBP9.56□□□□□ -0.88
SMAD3-205ENST00000558428 GLYATL2Q8WU03 294 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 TMEM230Q96A57 120 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 RCC1LQ96I51 464 aaKnown RBP9.56□□□□□ -0.88
SMAD3-205ENST00000558428 USMG5Q96IX5 58 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 SRSF8Q9BRL6 282 aaKnown RBP9.56□□□□□ -0.88
SMAD3-205ENST00000558428 AKIP1Q9NQ31 210 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 TMEM14BQ9NUH8 114 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 PTTG2Q9NZH5 202 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 KCNIP3Q9Y2W7 256 aa9.56□□□□□ -0.88
SMAD3-205ENST00000558428 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 A0A087WW49 117 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 TRBV9A0A0B4J1U6 114 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 IGLC7A0M8Q6 106 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 NAP1L6A6NFF2 107 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 FAM223BA6NKX1 122 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 DBX1A6NMT0 343 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 LINC01619G3V211 115 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 OR2J3O76001 311 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 CDS2O95674 445 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 DHFRP00374 187 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 DEFA4P12838 97 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 LINC00299Q6ZSB3 139 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 FAM223AQ8IWN6 122 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 OR10W1Q8NGF6 305 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 OR5B3Q8NH48 314 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 RBPMSQ93062 196 aaKnown RBP9.55□□□□□ -0.88
SMAD3-205ENST00000558428 LSM10Q969L4 123 aaKnown RBP9.55□□□□□ -0.88
SMAD3-205ENST00000558428 RRNAD1Q96FB5 475 aaKnown RBP9.55□□□□□ -0.88
SMAD3-205ENST00000558428 SLC25A21Q9BQT8 299 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-205ENST00000558428 NDUFA4L2Q9NRX3 87 aa9.55□□□□□ -0.88
SMAD3-205ENST00000558428 ANKRD34BA5PLL1 514 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 CENPXA8MT69 81 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 DUS4LO95620 317 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 HSPB1P04792 205 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 P0C879 139 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 OR13C7P0DN81 318 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 MECP2P51608 486 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 CCR6P51684 374 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 ATP5G2Q06055 141 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 EXOSC2Q13868 293 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 TMEM187Q14656 261 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 RBMS2Q15434 407 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 TMEM268Q5VZI3 342 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 HSD17B13Q7Z5P4 300 aaPredicted RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 SELENOHQ8IZQ5 122 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 NECAP1Q8NC96 275 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 LHFPL5Q8TAF8 219 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 S100ZQ8WXG8 99 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 GALNT14Q96FL9 552 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 TMEM56Q96MV1 263 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 FANCD2OSQ96PS1 177 aa9.54□□□□□ -0.88
SMAD3-205ENST00000558428 C7orf50Q9BRJ6 194 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 MCRIP2Q9BUT9 160 aaKnown RBP9.54□□□□□ -0.88
SMAD3-205ENST00000558428 A0A0G2JRQ6 117 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 ANXA3P12429 323 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 HIST1H1BP16401 226 aaKnown RBP9.53□□□□□ -0.88
SMAD3-205ENST00000558428 SLURP1P55000 103 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 HSPE1P61604 102 aaKnown RBP9.53□□□□□ -0.88
SMAD3-205ENST00000558428 SUPT4H1P63272 117 aaKnown RBP9.53□□□□□ -0.88
SMAD3-205ENST00000558428 WT1-ASQ06250 92 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 TMEM128Q5BJH2 165 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 ZNF343Q6P1L6 599 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 FAM219AQ8IW50 185 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 DCUN1D4Q92564 292 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 CCDC32Q9BV29 185 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 RANGRFQ9HD47 186 aaPredicted RBP9.53□□□□□ -0.88
SMAD3-205ENST00000558428 PRR13Q9NZ81 148 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 FBXL7Q9UJT9 491 aa9.53□□□□□ -0.88
SMAD3-205ENST00000558428 IGLV11-55A0A075B6I3 123 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 A0A0B4J293 547 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 NDUFB6O95139 128 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 NDUFB8O95169 186 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 PRCDQ00LT1 54 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 DEFA6Q01524 100 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 ZNF429Q86V71 674 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 CENPSQ8N2Z9 138 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 DLX4Q92988 240 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-205ENST00000558428 IL22RA2Q969J5 263 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 PDCD10Q9BUL8 212 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 GPR61Q9BZJ8 451 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 PEF1Q9UBV8 284 aaKnown RBP9.52□□□□□ -0.89
SMAD3-205ENST00000558428 TMEM56-RWDD3S4R434 201 aa9.52□□□□□ -0.89
SMAD3-205ENST00000558428 OVOL1O14753 267 aa9.51□□□□□ -0.89
SMAD3-205ENST00000558428 CYB5BO43169 146 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms