RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 MC5RP33032 325 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 FAM27BQ5VT28 67 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 LAMTOR1Q6IAA8 161 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 CYP2G1PQ6ZSU1 146 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 MARS2Q96GW9 593 aaKnown RBP11.84□□□□□ -0.51
SPG11-210ENST00000558319 DUX3Q96PT4 197 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 SCN7AQ01118 1682 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 NHSQ6T4R5 1651 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 DRAM1Q8N682 238 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 GCSAMQ8N6F7 178 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 FOXA2Q9Y261 457 aaPredicted RBP11.83□□□□□ -0.52
SPG11-210ENST00000558319 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 FBXL15Q9H469 300 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 PCSK4Q6UW60 755 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 PILRBQ9UKJ0 227 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 TRAV2A0A0B4J234 112 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 CEACAM4O75871 244 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 DXOO77932 396 aaKnown RBP11.83□□□□□ -0.52
SPG11-210ENST00000558319 PRDM13Q9H4Q3 707 aa11.83□□□□□ -0.52
SPG11-210ENST00000558319 TDRD15B5MCY1 1934 aaKnown RBP11.82□□□□□ -0.52
SPG11-210ENST00000558319 NPC2P61916 151 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 VKORC1Q9BQB6 163 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 C2orf88Q9BSF0 95 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 TNFRSF18Q9Y5U5 241 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 LHFPL6Q9Y693 200 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 COX6A1P12074 109 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
SPG11-210ENST00000558319 PRTN3P24158 256 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 CLDND2Q8NHS1 167 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 HIGD1CA8MV81 97 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 HOXA3O43365 443 aaPredicted RBP11.82□□□□□ -0.52
SPG11-210ENST00000558319 VENTXO95231 258 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 MRPL32Q9BYC8 188 aaKnown RBP11.82□□□□□ -0.52
SPG11-210ENST00000558319 CKAP5Q14008 2032 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 CD8AP01732 235 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 HS3ST3B1Q9Y662 390 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 STRCQ7RTU9 1775 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 UNC13CQ8NB66 2214 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 ODAMA1E959 279 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 FAM90A26D6RGX4 464 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 ASPHD2Q6ICH7 369 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 TMEM101Q96IK0 257 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 SDF2L1Q9HCN8 221 aa11.82□□□□□ -0.52
SPG11-210ENST00000558319 LSM4Q9Y4Z0 139 aaKnown RBP11.82□□□□□ -0.52
SPG11-210ENST00000558319 NPIPB4C9JG80 1138 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 ATP5LO75964 103 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 CELA3BP08861 270 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 ZNF585BQ52M93 769 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 COL22A1Q8NFW1 1626 aaPredicted RBP11.81□□□□□ -0.52
SPG11-210ENST00000558319 LOC390937A0A1W2PQ73 354 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 TMEM250H0YL14 139 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 RPP21Q9H633 154 aaKnown RBP11.81□□□□□ -0.52
SPG11-210ENST00000558319 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 EVI2AP22794 236 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 GNG5P63218 68 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 SPTBP11277 2137 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 BSPH1Q075Z2 132 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 C1orf100Q5SVJ3 147 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 Q96M66 194 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 LINC01587Q99440 93 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
SPG11-210ENST00000558319 VCX2Q9H322 139 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 CD200R1LQ6Q8B3 271 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 SHISA5Q8N114 240 aa11.81□□□□□ -0.52
SPG11-210ENST00000558319 IGLV1-36A0A0B4J1U3 117 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 PRR32B1ATL7 298 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 NDUFS6O75380 124 aaKnown RBP11.8□□□□□ -0.52
SPG11-210ENST00000558319 C1QTNF9P0C862 333 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 CNTFRP26992 372 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 RPL23P62829 140 aaKnown RBP11.8□□□□□ -0.52
SPG11-210ENST00000558319 FBLIM1Q8WUP2 373 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 G6PC2Q9NQR9 355 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 RGPD4Q7Z3J3 1758 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 NPPCP23582 126 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 FAM71F2Q6NXP2 309 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 C1QL4Q86Z23 238 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 IZUMO1RA6ND01 250 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 TEX45Q8NA69 505 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 NBEAP1P0C6P0 100 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 ZNF146Q15072 292 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 TIMM23BQ5SRD1 257 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 SAP25Q8TEE9 199 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 TRPM3Q9HCF6 1732 aaPredicted RBP11.8□□□□□ -0.52
SPG11-210ENST00000558319 TRAV14DV4A0A0A6YYC5 116 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
SPG11-210ENST00000558319 ABHD17AQ96GS6 310 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 GTSF1LQ9H1H1 148 aa11.8□□□□□ -0.52
SPG11-210ENST00000558319 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 SLC25A47Q6Q0C1 308 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 COQ2Q96H96 371 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 RBMY1BA6NDE4 496 aaKnown RBP11.79□□□□□ -0.52
SPG11-210ENST00000558319 RBMY1EA6NEQ0 496 aaKnown RBP11.79□□□□□ -0.52
SPG11-210ENST00000558319 RBMY1DP0C7P1 496 aaKnown RBP11.79□□□□□ -0.52
SPG11-210ENST00000558319 RBMY1A1P0DJD3 496 aaKnown RBP11.79□□□□□ -0.52
SPG11-210ENST00000558319 RBMY1CP0DJD4 496 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 EEF1AKMT3Q96AZ1 226 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 RP1P56715 2156 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms