RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CROCCP2Q86T23 111 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 PRR22Q8IZ63 422 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ATOH7Q8N100 152 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 FTMTQ8N4E7 242 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 DEFB125Q8N687 156 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 OR8G5Q8NG78 346 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 OR13G1Q8NGZ3 307 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 FAM19A4Q96LR4 140 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 OR2A7Q96R45 310 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 PKMYT1Q99640 499 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 RARRES2Q99969 163 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC25A39Q9BZJ4 359 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MAP1LC3BQ9GZQ8 125 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 OR51I2Q9H344 312 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 POMKQ9H5K3 350 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 BCL2L10Q9HD36 194 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CLCF1Q9UBD9 225 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 VAX2Q9UIW0 290 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TRAPPC2LQ9UL33 140 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 HIGD1AQ9Y241 93 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 KLF12Q9Y4X4 402 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MYLKQ15746 1914 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SCN7AQ01118 1682 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 KMT2BQ9UMN6 2715 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 A0A0G2JMM0 328 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 A0A1W2PPB8 328 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM212A6NML5 194 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 NCBP2LA6PVI3 153 aaKnown RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CD300LBA8K4G0 201 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 HMSDA8MTL9 139 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 KIR3DP1A8MWS1 328 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TRIM49D1C9J1S8 452 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 K7N7A8 449 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CRXO43186 299 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TBL1XO60907 577 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 LY6G6DO95868 133 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CATP04040 527 aaKnown RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 HLA-DQB2P05538 268 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 GKN3PP0CG01 181 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 AQP1P29972 269 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 REG1BP48304 166 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 GNG4P50150 75 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TCL1AP56279 114 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 UBE2NP61088 152 aaKnown RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 GGTLC2Q14390 218 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF266Q14584 549 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 NEDD8Q15843 81 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 Q6ZVH6 145 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC25A26Q70HW3 274 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 GAPTQ8N292 157 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ZIC4Q8N9L1 334 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM229BQ8NBD8 167 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC25A46Q96AG3 418 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 LRRC58Q96CX6 371 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MUCL1Q96DR8 90 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 IMMP1LQ96LU5 166 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 IP6K3Q96PC2 410 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM59Q9BXS4 323 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MMP26Q9NRE1 261 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF226Q9NYT6 803 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF230Q9UIE0 474 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TBX21Q9UL17 535 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 POMPQ9Y244 141 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 KIF26BQ2KJY2 2108 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 HCFC1P51610 2035 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 TMED7-TICAM2A0A0A6YYA0 188 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 A0A0G2JRQ6 117 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 A0A1B0GW55 424 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 A0A1W2PRS3 328 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 MCRIP1C9JLW8 97 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 J3KT08 172 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 M0R2P5 195 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 CDRT1O95170 752 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 REG1AP05451 166 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUX4L2P0CJ85 424 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUX4L3P0CJ86 424 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUX4L5P0CJ88 424 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUX4L6P0CJ89 424 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUX4L7P0CJ90 424 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PGA3P0DJD8 388 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ELK1P19419 428 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 IMPA1P29218 277 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 MMDQ15546 238 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 IGFBP7Q16270 282 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 SSX1Q16384 188 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 HLA-DRB5Q30154 266 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 DUX4L9Q6RFH8 374 aaPredicted RBP1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ARL9Q6T311 187 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 Q6ZS92 163 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 SUMF2Q8NBJ7 301 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 NUP35Q8NFH5 326 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR11H6Q8NGC7 330 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR51T1Q8NGJ9 327 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR5AK2Q8NH90 309 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 LMX1AQ8TE12 382 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 RXFP2Q8WXD0 754 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 OR5P3Q8WZ94 311 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PPCDCQ96CD2 204 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 PHYHIPLQ96FC7 376 aa1.16□□□□□ -2.22
HIF1A-212ENST00000557538 ATP5SQ99766 215 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms