RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 XIRP1Q702N8 1843 aaKnown RBP7.59□□□□□ -1.19
SYNE3-205ENST00000557275 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 FAM90A27PA6NNH2 459 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 ATOH7Q8N100 152 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 IGKCP01834 107 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 RND2P52198 227 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 RND3P61587 244 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 CCL26Q9Y258 94 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 PSME4Q14997 1843 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 DPH3P1Q9H4G8 78 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 OTX1P32242 354 aaPredicted RBP7.59□□□□□ -1.19
SYNE3-205ENST00000557275 DLK2Q6UY11 383 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 TRAV5A0A0B4J249 113 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 RPL34P49207 117 aaKnown RBP7.59□□□□□ -1.19
SYNE3-205ENST00000557275 IGLV3-16A0A075B6K0 115 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 SOCS1O15524 211 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 LINC00305Q7Z4B0 112 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 OSR1Q8TAX0 266 aaPredicted RBP7.59□□□□□ -1.19
SYNE3-205ENST00000557275 JMJD8Q96S16 334 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 DCTN5Q9BTE1 182 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 TLNRD1Q9H1K6 362 aa7.59□□□□□ -1.19
SYNE3-205ENST00000557275 CD5LO43866 347 aa7.59□□□□□ -1.2
SYNE3-205ENST00000557275 DCAF10Q5QP82 559 aa7.59□□□□□ -1.2
SYNE3-205ENST00000557275 BOD1L2Q8IYS8 172 aa7.59□□□□□ -1.2
SYNE3-205ENST00000557275 APCDD1LQ8NCL9 501 aa7.59□□□□□ -1.2
SYNE3-205ENST00000557275 RHNO1Q9BSD3 238 aa7.59□□□□□ -1.2
SYNE3-205ENST00000557275 RALGAPA2Q2PPJ7 1873 aa7.59□□□□□ -1.2
SYNE3-205ENST00000557275 CRYBB3P26998 211 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 LDLRAD1Q5T700 205 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 TRGV11A0A075B6L2 103 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 THY1P04216 161 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 SPRED2Q7Z698 418 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 IGKV3D-11A0A0A0MRZ8 115 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 IGKV3-11P04433 115 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 NGFRP08138 427 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 KLK2P20151 261 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 DUX3Q96PT4 197 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 NABP2Q9BQ15 211 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 MRPS18AQ9NVS2 196 aaKnown RBP7.58□□□□□ -1.2
SYNE3-205ENST00000557275 IFI6P09912 130 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 COL10A1Q03692 680 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 ZNF48Q96MX3 618 aaPredicted RBP7.58□□□□□ -1.2
SYNE3-205ENST00000557275 MFRPQ9BY79 579 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 VSIG8P0DPA2 414 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 SIGLEC14Q08ET2 396 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 UNQ5815/PRO19632Q6UWF5 114 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 SELENOHQ8IZQ5 122 aaKnown RBP7.58□□□□□ -1.2
SYNE3-205ENST00000557275 FAM89BQ8N5H3 189 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 TRAV24A0A0B4J272 114 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 ZNHIT1O43257 154 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 GCHFRP30047 84 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 PIGYQ3MUY2 71 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 MIC13Q5XKP0 118 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 OR9G9P0C7N8 305 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 ZP1P60852 638 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 A0A0U1RQS6 177 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 ATG4DQ86TL0 474 aaPredicted RBP7.58□□□□□ -1.2
SYNE3-205ENST00000557275 R4GN57 208 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 GRIFINA4D1Z8 144 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 SUMO4Q6EEV6 95 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 SLC25A48Q6ZT89 311 aaKnown RBP7.58□□□□□ -1.2
SYNE3-205ENST00000557275 OR52E5Q8NH55 327 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 C18orf15Q96N68 181 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 C2orf82Q6UX34 121 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 OR9G1Q8NH87 305 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 VKORC1Q9BQB6 163 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 UBL5Q9BZL1 73 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 RTN4RQ9BZR6 473 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 MEX3AA1L020 520 aaKnown RBP7.58□□□□□ -1.2
SYNE3-205ENST00000557275 FOXI3A8MTJ6 420 aaPredicted RBP7.58□□□□□ -1.2
SYNE3-205ENST00000557275 NDUFA3O95167 84 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 NBEAP1P0C6P0 100 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 WNT10AQ9GZT5 417 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 FZR1Q9UM11 496 aa7.58□□□□□ -1.2
SYNE3-205ENST00000557275 TRGV2A0A075B6R0 118 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 IGHV3OR16-12A0A075B7B8 117 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 IGKV3D-15A0A087WSY6 115 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 NPIPB13A6NJU9 1138 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 IGKV3-15P01624 115 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 TRACP01848 142 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 FGFRL1Q8N441 504 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 A0A0G2JMM0 328 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 A0A1W2PPB8 328 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 KIR3DP1A8MWS1 328 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 GFRA3O60609 400 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 LRRC61Q9BV99 259 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 EPDR1Q9UM22 224 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 LAGE3Q14657 143 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
SYNE3-205ENST00000557275 FOXD3Q9UJU5 478 aaPredicted RBP7.57□□□□□ -1.2
SYNE3-205ENST00000557275 IGKV3OR2-268A0A0C4DH90 116 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 LOC102723996A0A087X1L8 192 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 FOXH1O75593 365 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 ETHE1O95571 254 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 H0YL77 283 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 M0R381 172 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 BGLAPP02818 100 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 GPR179Q6PRD1 2367 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 UTF1Q5T230 341 aa7.57□□□□□ -1.2
SYNE3-205ENST00000557275 FNDC4Q9H6D8 234 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms