RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 ATP5G2Q06055 141 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 EXOSC2Q13868 293 aaKnown RBP17.58■□□□□ 0.4
TDP1-216ENST00000556867 OR51S1Q8NGJ8 323 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 FANCD2OSQ96PS1 177 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 PEF1Q9UBV8 284 aaKnown RBP17.58■□□□□ 0.4
TDP1-216ENST00000556867 ZMAT5Q9UDW3 170 aaKnown RBP17.58■□□□□ 0.4
TDP1-216ENST00000556867 C14orf166Q9Y224 244 aaKnown RBP17.58■□□□□ 0.4
TDP1-216ENST00000556867 NSG2Q9Y328 171 aa17.58■□□□□ 0.4
TDP1-216ENST00000556867 C15orf61A6NNL5 157 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 B3GALNT1O75752 331 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 OR2J3O76001 311 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 REG1AP05451 166 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 TRAPPC2P0DI81 140 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 TRAPPC2BP0DI82 140 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 INSL3P51460 131 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 HSD17B13Q7Z5P4 300 aaPredicted RBP17.57■□□□□ 0.4
TDP1-216ENST00000556867 Q8N402 240 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 RTBDNQ9BSG5 229 aaPredicted RBP17.57■□□□□ 0.4
TDP1-216ENST00000556867 NDUFA4L2Q9NRX3 87 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 TMEM14BQ9NUH8 114 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 FKBP11Q9NYL4 201 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 SCP2D1Q9UJQ7 156 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 OR51B2Q9Y5P1 312 aa17.57■□□□□ 0.4
TDP1-216ENST00000556867 TRBV12-3P01733 135 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 HIST1H1BP16401 226 aaKnown RBP17.56■□□□□ 0.4
TDP1-216ENST00000556867 KLF9Q13886 244 aaPredicted RBP17.56■□□□□ 0.4
TDP1-216ENST00000556867 C15orf32Q32M92 178 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 SPANXN2Q5MJ10 180 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 H2BFWTQ7Z2G1 175 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 OR6Q1Q8NGQ2 317 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 OR5B3Q8NH48 314 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 C5orf66Q9H5L9 145 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 FBXL7Q9UJT9 491 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 GPR132Q9UNW8 380 aa17.56■□□□□ 0.4
TDP1-216ENST00000556867 IGLV11-55A0A075B6I3 123 aa17.55■□□□□ 0.4
TDP1-216ENST00000556867 UCP1P25874 307 aa17.55■□□□□ 0.4
TDP1-216ENST00000556867 AP3S2P59780 193 aa17.55■□□□□ 0.4
TDP1-216ENST00000556867 FAM209BQ5JX69 171 aa17.55■□□□□ 0.4
TDP1-216ENST00000556867 GDPD1Q8N9F7 314 aa17.55■□□□□ 0.4
TDP1-216ENST00000556867 OR10W1Q8NGF6 305 aa17.55■□□□□ 0.4
TDP1-216ENST00000556867 MCUBQ9NWR8 336 aa17.55■□□□□ 0.4
TDP1-216ENST00000556867 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.54■□□□□ 0.4
TDP1-216ENST00000556867 DBX1A6NMT0 343 aa17.54■□□□□ 0.4
TDP1-216ENST00000556867 DEFA4P12838 97 aa17.54■□□□□ 0.4
TDP1-216ENST00000556867 FAUP35544 74 aaKnown RBP17.54■□□□□ 0.4
TDP1-216ENST00000556867 WT1-ASQ06250 92 aa17.54■□□□□ 0.4
TDP1-216ENST00000556867 ACSM6Q6P461 480 aa17.54■□□□□ 0.4
TDP1-216ENST00000556867 ZNF429Q86V71 674 aa17.54■□□□□ 0.4
TDP1-216ENST00000556867 MRAPQ8TCY5 172 aa17.54■□□□□ 0.4
TDP1-216ENST00000556867 LSM10Q969L4 123 aaKnown RBP17.54■□□□□ 0.4
TDP1-216ENST00000556867 ATG12O94817 140 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 NDUFB8O95169 186 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 IGKV1-5P01602 117 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 P0C879 139 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 KLF5Q13887 457 aaPredicted RBP17.53■□□□□ 0.4
TDP1-216ENST00000556867 TRIM16LQ309B1 348 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 SP6Q3SY56 376 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 TOMM5Q8N4H5 51 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 OR4A16Q8NH70 328 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 DEDD2Q8WXF8 326 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 HINT2Q9BX68 163 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 SRRQ9GZT4 340 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 NAA60Q9H7X0 242 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 TGP01266 2768 aa17.53■□□□□ 0.4
TDP1-216ENST00000556867 WI2-2373I1.2A0A1W2PRP0 233 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 CRYM-AS1A6NIL9 109 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 K7EIL1 84 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 OR13C7P0DN81 318 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 AKR1C2P52895 323 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 TMEM56Q96MV1 263 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 SCGB3A2Q96PL1 93 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 TMEM222Q9H0R3 208 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 DMRT1Q9Y5R6 373 aa17.52■□□□□ 0.4
TDP1-216ENST00000556867 SORL1Q92673 2214 aa17.52■□□□□ 0.39
TDP1-216ENST00000556867 TEX13DA0A0J9YY54 714 aaPredicted RBP17.51■□□□□ 0.39
TDP1-216ENST00000556867 BMPR1BO00238 502 aa17.51■□□□□ 0.39
TDP1-216ENST00000556867 SAP30O75446 220 aa17.51■□□□□ 0.39
TDP1-216ENST00000556867 OR5AC1P0C628 307 aa17.51■□□□□ 0.39
TDP1-216ENST00000556867 RPEL1Q2QD12 228 aa17.51■□□□□ 0.39
TDP1-216ENST00000556867 CYB5BO43169 146 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 IZUMO4Q1ZYL8 232 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 GLYATL2Q8WU03 294 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 EEF1AKMT3Q96AZ1 226 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 CXorf58Q96LI9 332 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 CCDC140Q96MF4 163 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 ELOVL1Q9BW60 279 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 THYN1Q9P016 225 aa17.5■□□□□ 0.39
TDP1-216ENST00000556867 F11RQ9Y624 299 aaKnown RBP17.5■□□□□ 0.39
TDP1-216ENST00000556867 CDS2O95674 445 aa17.49■□□□□ 0.39
TDP1-216ENST00000556867 SYNJ2BPP57105 145 aa17.49■□□□□ 0.39
TDP1-216ENST00000556867 HSPE1P61604 102 aaKnown RBP17.49■□□□□ 0.39
TDP1-216ENST00000556867 PRCDQ00LT1 54 aa17.49■□□□□ 0.39
TDP1-216ENST00000556867 DHODHQ02127 395 aa17.49■□□□□ 0.39
TDP1-216ENST00000556867 TMEM230Q96A57 120 aa17.49■□□□□ 0.39
TDP1-216ENST00000556867 MECP2P51608 486 aaKnown RBP17.48■□□□□ 0.39
TDP1-216ENST00000556867 TATDN3Q17R31 274 aa17.48■□□□□ 0.39
TDP1-216ENST00000556867 SGPP2Q8IWX5 399 aa17.48■□□□□ 0.39
TDP1-216ENST00000556867 OR9G4Q8NGQ1 327 aa17.48■□□□□ 0.39
TDP1-216ENST00000556867 RRNAD1Q96FB5 475 aaKnown RBP17.48■□□□□ 0.39
TDP1-216ENST00000556867 OR4C12Q96R67 309 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms