RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SCGB3A2Q96PL1 93 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 AKIP1Q9NQ31 210 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 MCUBQ9NWR8 336 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 COPZ2Q9P299 210 aa7.46□□□□□ -1.22
SRP54-210ENST00000556380 IGLC7A0M8Q6 106 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 CRYM-AS1A6NIL9 109 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 DBX1A6NMT0 343 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 CDS2O95674 445 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 PF4P02776 101 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 TRGV3P03979 118 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 SERPINE2P07093 398 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
SRP54-210ENST00000556380 AREGP15514 252 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 CTRB1P17538 263 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 PSMB6P28072 239 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 CD40LGP29965 261 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 TPPP2P59282 170 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 ERVK-16P61578 105 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 KPRPQ5T749 579 aaPredicted RBP7.45□□□□□ -1.22
SRP54-210ENST00000556380 CTRB2Q6GPI1 263 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 C19orf35Q6ZS72 473 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 OR11H1Q8NG94 326 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 OR1N2Q8NGR9 330 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 LHFPL5Q8TAF8 219 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 FYTTD1Q96QD9 318 aaKnown RBP7.45□□□□□ -1.22
SRP54-210ENST00000556380 OR5B12Q96R08 314 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 CITED4Q96RK1 184 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 PHB2Q99623 299 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 SRSF8Q9BRL6 282 aaKnown RBP7.45□□□□□ -1.22
SRP54-210ENST00000556380 TMEM222Q9H0R3 208 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 ALX4Q9H161 411 aaPredicted RBP7.45□□□□□ -1.22
SRP54-210ENST00000556380 NAA60Q9H7X0 242 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 NDUFA4L2Q9NRX3 87 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 TMEM14BQ9NUH8 114 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 C14orf166Q9Y224 244 aaKnown RBP7.45□□□□□ -1.22
SRP54-210ENST00000556380 NSG2Q9Y328 171 aa7.45□□□□□ -1.22
SRP54-210ENST00000556380 TGP01266 2768 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 A0A0B4J293 547 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 TEX13DA0A0J9YY54 714 aaPredicted RBP7.44□□□□□ -1.22
SRP54-210ENST00000556380 G3V4G9 280 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 IGHV3-11P01762 117 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 PRH1P02810 166 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 OR5AC1P0C628 307 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 SUPT4H1P63272 117 aaKnown RBP7.44□□□□□ -1.22
SRP54-210ENST00000556380 WT1-ASQ06250 92 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 IZUMO4Q1ZYL8 232 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 BEAN1Q3B7T3 259 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 SLC25A42Q86VD7 318 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 OR10W1Q8NGF6 305 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 OR1L8Q8NGR8 309 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 GALNT14Q96FL9 552 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 USMG5Q96IX5 58 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 TMEM56Q96MV1 263 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 QTRT1Q9BXR0 403 aaKnown RBP7.44□□□□□ -1.22
SRP54-210ENST00000556380 COMMD5Q9GZQ3 224 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 ZNF355PQ9NSJ1 428 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 COA4Q9NYJ1 87 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 PTTG2Q9NZH5 202 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 PRNDQ9UKY0 176 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 ZNF257Q9Y2Q1 563 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 OR51B2Q9Y5P1 312 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 DMRT1Q9Y5R6 373 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 TMEM56-RWDD3S4R434 201 aa7.44□□□□□ -1.22
SRP54-210ENST00000556380 IGLV11-55A0A075B6I3 123 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 IGHV4OR15-8A0A075B7B6 117 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 A0A087WW49 117 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 PIGBOS1A0A0B4J2F0 54 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 A0A0G2JLM5 398 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 A0A0G2JRQ6 117 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 TMEM238LA0A1B0GVL6 79 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 NAP1L6A6NFF2 107 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 C15orf61A6NNL5 157 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 PLA2G10O15496 165 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 SNAPC5O75971 98 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 ATG12O94817 140 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 HSPB1P04792 205 aaKnown RBP7.43□□□□□ -1.22
SRP54-210ENST00000556380 TRAPPC2P0DI81 140 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 TRAPPC2BP0DI82 140 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 IL7P13232 177 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 IGLL1P15814 213 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 RHOGP84095 191 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 DEFA5Q01523 94 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 DHODHQ02127 395 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 ZNF616Q08AN1 781 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 TMEM187Q14656 261 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 ZNF57Q68EA5 555 aaPredicted RBP7.43□□□□□ -1.22
SRP54-210ENST00000556380 THOC7Q6I9Y2 204 aaKnown RBP7.43□□□□□ -1.22
SRP54-210ENST00000556380 ZNF343Q6P1L6 599 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 Q6ZRM9 215 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 H2BFWTQ7Z2G1 175 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 SELENOHQ8IZQ5 122 aaKnown RBP7.43□□□□□ -1.22
SRP54-210ENST00000556380 NECAP1Q8NC96 275 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 OR5B3Q8NH48 314 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 S100ZQ8WXG8 99 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 WDR89Q96FK6 387 aaPredicted RBP7.43□□□□□ -1.22
SRP54-210ENST00000556380 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
SRP54-210ENST00000556380 TSC22D3Q99576 134 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 SLC25A21Q9BQT8 299 aaPredicted RBP7.43□□□□□ -1.22
SRP54-210ENST00000556380 C7orf50Q9BRJ6 194 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms