RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 RSL24D1Q9UHA3 163 aaKnown RBP8.86□□□□□ -0.99
SLIRP-205ENST00000556310 SORL1Q92673 2214 aa8.86□□□□□ -0.99
SLIRP-205ENST00000556310 IGLC7A0M8Q6 106 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 H0Y980 276 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 GSTZ1O43708 216 aaPredicted RBP8.85□□□□□ -0.99
SLIRP-205ENST00000556310 SAP30O75446 220 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 OR2J3O76001 311 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 TRBV12-3P01733 135 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 TNFSF8P32971 234 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 G6PCP35575 357 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 ECI1P42126 302 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 PIGPP57054 158 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 ATP5G2Q06055 141 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 DCTN2Q13561 401 aaKnown RBP8.85□□□□□ -0.99
SLIRP-205ENST00000556310 KLK9Q2XQG4 91 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 C15orf32Q32M92 178 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 SCGB2B2Q4G0G5 96 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 C19orf35Q6ZS72 473 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 HSD17B13Q7Z5P4 300 aaPredicted RBP8.85□□□□□ -0.99
SLIRP-205ENST00000556310 OR1L8Q8NGR8 309 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 TERB2Q8NHR7 220 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 TSC22D3Q99576 134 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 KLK9Q9UKQ9 250 aa8.85□□□□□ -0.99
SLIRP-205ENST00000556310 C15orf61A6NNL5 157 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 DISC1C4P0D8 188 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 SNAPC5O75971 98 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 REG1AP05451 166 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 SERPINE2P07093 398 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 AKAIN1P0CW23 69 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 HIST1H1BP16401 226 aaKnown RBP8.84□□□□□ -0.99
SLIRP-205ENST00000556310 PI3P19957 117 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 FAAP20Q6NZ36 180 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 CCDC71LQ8N9Z2 235 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 OR4C16Q8NGL9 310 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 OR13C8Q8NGS7 320 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 ZFAND1Q8TCF1 268 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 MRGPRFQ96AM1 343 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 SEC22AQ96IW7 307 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 SOSTQ9BQB4 213 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 ELOVL1Q9BW60 279 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 FBXL7Q9UJT9 491 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 PRNDQ9UKY0 176 aa8.84□□□□□ -0.99
SLIRP-205ENST00000556310 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
SLIRP-205ENST00000556310 IGLV11-55A0A075B6I3 123 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.83□□□□□ -1
SLIRP-205ENST00000556310 TEX50A0A1B0GTY4 177 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 ANKRD20A5PA0PJZ0 165 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 FABP12A6NFH5 140 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 BMPR1BO00238 502 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 IGKV1-39P01597 117 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 IGKV1D-39P04432 117 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 CTSDP07339 412 aaPredicted RBP8.83□□□□□ -1
SLIRP-205ENST00000556310 TRAPPC2P0DI81 140 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 TRAPPC2BP0DI82 140 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 DEFA4P12838 97 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 KLF5Q13887 457 aaPredicted RBP8.83□□□□□ -1
SLIRP-205ENST00000556310 SURF2Q15527 256 aaPredicted RBP8.83□□□□□ -1
SLIRP-205ENST00000556310 RPEL1Q2QD12 228 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 GDPD1Q8N9F7 314 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 OR6Q1Q8NGQ2 317 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 OR5B3Q8NH48 314 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 MARCH1Q8TCQ1 289 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
SLIRP-205ENST00000556310 OR4C12Q96R67 309 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 PRR25Q96S07 402 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 TP53RKQ96S44 253 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 PRRT1Q99946 306 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 NDUFA4L2Q9NRX3 87 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 TMEM14BQ9NUH8 114 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 SLC2A8Q9NY64 477 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 FKBP11Q9NYL4 201 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 COPZ2Q9P299 210 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 NSG2Q9Y328 171 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 OR51B2Q9Y5P1 312 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 COL7A1Q02388 2944 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 DNAH9Q9NYC9 4486 aa8.83□□□□□ -1
SLIRP-205ENST00000556310 C3orf85A0A1B0GTC6 90 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 CYB5BO43169 146 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 B3GALNT1O75752 331 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 NDUFB8O95169 186 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 S100A5P33763 92 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 SYNJ2BPP57105 145 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 WT1-ASQ06250 92 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 H2BFWTQ7Z2G1 175 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 OR10W1Q8NGF6 305 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 OR9G4Q8NGQ1 327 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 EEF1AKMT3Q96AZ1 226 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 CCDC140Q96MF4 163 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 C14orf166Q9Y224 244 aaKnown RBP8.82□□□□□ -1
SLIRP-205ENST00000556310 V9GYH0 126 aa8.82□□□□□ -1
SLIRP-205ENST00000556310 DBX1A6NMT0 343 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 ATG12O94817 140 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 LY86O95711 162 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 OR13C7P0DN81 318 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 UCP1P25874 307 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 TATDN3Q17R31 274 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 OR51S1Q8NGJ8 323 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 OR4A16Q8NH70 328 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 TRIM63Q969Q1 353 aa8.81□□□□□ -1
SLIRP-205ENST00000556310 CXorf58Q96LI9 332 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms