RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 MAP2K4P45985 399 aa0.94□□□□□ -2.26
LINC00871-202ENST00000556071 SUPT4H1P63272 117 aaKnown RBP0.94□□□□□ -2.26
LINC00871-202ENST00000556071 CMTM5Q96DZ9 223 aa0.94□□□□□ -2.26
LINC00871-202ENST00000556071 SERPINI1Q99574 410 aa0.94□□□□□ -2.26
LINC00871-202ENST00000556071 OR51I2Q9H344 312 aa0.94□□□□□ -2.26
LINC00871-202ENST00000556071 C1orf232A0A0U1RR37 186 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 PFDN6O15212 129 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 SRP19P09132 144 aaKnown RBP0.93□□□□□ -2.26
LINC00871-202ENST00000556071 METTL15P1P0C7V9 234 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 RUNX1Q01196 453 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 RPL18Q07020 188 aaKnown RBP0.93□□□□□ -2.26
LINC00871-202ENST00000556071 GID4Q8IVV7 300 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 C10orf67Q8IYJ2 551 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 TRABDQ9H4I3 376 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 EML6Q6ZMW3 1958 aa0.93□□□□□ -2.26
LINC00871-202ENST00000556071 C1QAP02745 245 aa0.92□□□□□ -2.26
LINC00871-202ENST00000556071 FGF6P10767 208 aa0.92□□□□□ -2.26
LINC00871-202ENST00000556071 NFYAP23511 347 aaPredicted RBP0.92□□□□□ -2.26
LINC00871-202ENST00000556071 RPL12P30050 165 aaKnown RBP0.92□□□□□ -2.26
LINC00871-202ENST00000556071 ZNF846Q147U1 533 aa0.92□□□□□ -2.26
LINC00871-202ENST00000556071 C12orf29Q8N999 325 aa0.92□□□□□ -2.26
LINC00871-202ENST00000556071 LAMB4A4D0S4 1761 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 TRAV14DV4A0A0A6YYC5 116 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 M0QX08 132 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 NOS1APO75052 506 aaPredicted RBP0.91□□□□□ -2.26
LINC00871-202ENST00000556071 YEATS4O95619 227 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 KRT7P08729 469 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 FAM228BP0C875 321 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 KCNE1P15382 129 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 EIF2B2P49770 351 aaKnown RBP0.91□□□□□ -2.26
LINC00871-202ENST00000556071 CDK10Q15131 360 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 TEX36Q5VZQ5 186 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 ZNF550Q7Z398 422 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 AQP3Q92482 292 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 ROPN1LQ96C74 230 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 DIRAS2Q96HU8 199 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 IL36BQ9NZH7 164 aa0.91□□□□□ -2.26
LINC00871-202ENST00000556071 TNRC6BQ9UPQ9 1833 aaKnown RBP0.91□□□□□ -2.26
LINC00871-202ENST00000556071 C21orf140B9A014 251 aa0.9□□□□□ -2.27
LINC00871-202ENST00000556071 BLVRAP53004 296 aa0.9□□□□□ -2.27
LINC00871-202ENST00000556071 MAP3K7CLP57077 242 aa0.9□□□□□ -2.27
LINC00871-202ENST00000556071 MLLT11Q13015 90 aaPredicted RBP0.9□□□□□ -2.27
LINC00871-202ENST00000556071 BATFQ16520 125 aa0.9□□□□□ -2.27
LINC00871-202ENST00000556071 C1orf195Q5TG92 126 aa0.9□□□□□ -2.27
LINC00871-202ENST00000556071 OR5AC2Q9NZP5 309 aa0.9□□□□□ -2.27
LINC00871-202ENST00000556071 TTC21AQ8NDW8 1320 aa0.89□□□□□ -2.27
LINC00871-202ENST00000556071 EML5Q05BV3 1969 aa0.89□□□□□ -2.27
LINC00871-202ENST00000556071 EVPLLA8MZ36 301 aa0.89□□□□□ -2.27
LINC00871-202ENST00000556071 CLPSP04118 112 aa0.89□□□□□ -2.27
LINC00871-202ENST00000556071 C8orf88P0DMB2 117 aa0.89□□□□□ -2.27
LINC00871-202ENST00000556071 COX5BP10606 129 aa0.89□□□□□ -2.27
LINC00871-202ENST00000556071 RPS4Y1P22090 263 aaKnown RBP0.89□□□□□ -2.27
LINC00871-202ENST00000556071 TNRC6AQ8NDV7 1962 aaKnown RBP0.88□□□□□ -2.27
LINC00871-202ENST00000556071 ZNF80P51504 273 aaPredicted RBP0.88□□□□□ -2.27
LINC00871-202ENST00000556071 CAV1Q03135 178 aa0.88□□□□□ -2.27
LINC00871-202ENST00000556071 TMED1Q13445 227 aa0.88□□□□□ -2.27
LINC00871-202ENST00000556071 KISS1Q15726 138 aa0.88□□□□□ -2.27
LINC00871-202ENST00000556071 SYPL2Q5VXT5 272 aa0.88□□□□□ -2.27
LINC00871-202ENST00000556071 DEFB125Q8N687 156 aa0.88□□□□□ -2.27
LINC00871-202ENST00000556071 C11orf40Q8WZ69 217 aa0.88□□□□□ -2.27
LINC00871-202ENST00000556071 EIF4G1Q04637 1599 aaKnown RBP0.87□□□□□ -2.27
LINC00871-202ENST00000556071 FABP5P3A8MUU1 101 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 SHBGP04278 402 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 PRM2P04554 102 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 UBE2IP63279 158 aaKnown RBP0.87□□□□□ -2.27
LINC00871-202ENST00000556071 MED21Q13503 144 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 GLT8D1Q68CQ7 371 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 LCN15Q6UWW0 184 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 AAED1Q7RTV5 226 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 TMEM156Q8N614 296 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 WFDC11Q8NEX6 87 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 MRPL57Q9BQC6 102 aaKnown RBP0.87□□□□□ -2.27
LINC00871-202ENST00000556071 HDHD2Q9H0R4 259 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 EFCAB1Q9HAE3 211 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 C3orf18Q9UK00 162 aa0.87□□□□□ -2.27
LINC00871-202ENST00000556071 ABCC11Q96J66 1382 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 LINC00854A0A1B0GVQ3 168 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 CXCR6O00574 342 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 CD151P48509 253 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 CLVS2Q5SYC1 327 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 FAM9CQ8IZT9 166 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 OR4C6Q8NH72 309 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 CISHQ9NSE2 258 aa0.86□□□□□ -2.27
LINC00871-202ENST00000556071 DMTNQ08495 405 aa0.85□□□□□ -2.27
LINC00871-202ENST00000556071 GUK1Q16774 197 aa0.85□□□□□ -2.27
LINC00871-202ENST00000556071 IBA57Q5T440 356 aaKnown RBP0.85□□□□□ -2.27
LINC00871-202ENST00000556071 TMEM106AQ96A25 262 aa0.85□□□□□ -2.27
LINC00871-202ENST00000556071 CNBD2Q96M20 576 aa0.85□□□□□ -2.27
LINC00871-202ENST00000556071 FAM96AQ9H5X1 160 aa0.85□□□□□ -2.27
LINC00871-202ENST00000556071 A0A0J9YY10 115 aa0.84□□□□□ -2.27
LINC00871-202ENST00000556071 A0A1B0GX78 115 aa0.84□□□□□ -2.27
LINC00871-202ENST00000556071 SNRNP200O75643 2136 aaKnown RBP0.84□□□□□ -2.27
LINC00871-202ENST00000556071 MARCKSL1P49006 195 aa0.84□□□□□ -2.27
LINC00871-202ENST00000556071 LRRN1Q6UXK5 716 aa0.84□□□□□ -2.27
LINC00871-202ENST00000556071 PIGXQ8TBF5 258 aa0.84□□□□□ -2.27
LINC00871-202ENST00000556071 COL4A5P29400 1685 aa0.84□□□□□ -2.28
LINC00871-202ENST00000556071 TRBV20OR9-2A0A075B6H5 130 aa0.83□□□□□ -2.28
LINC00871-202ENST00000556071 A0A087WX48 190 aa0.83□□□□□ -2.28
LINC00871-202ENST00000556071 INMT-MINDY4F8WBC2 141 aa0.83□□□□□ -2.28
LINC00871-202ENST00000556071 APOEP02649 317 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms