RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TMEM61Q8N0U2 210 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 SAMD12Q8N8I0 201 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 UXS1Q8NBZ7 420 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 OR10W1Q8NGF6 305 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 ZNF502Q8TBZ5 544 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 YIPF6Q96EC8 236 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 CXorf58Q96LI9 332 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 SRSF8Q9BRL6 282 aaKnown RBP8.1□□□□□ -1.11
TDP1-212ENST00000555565 QTRT1Q9BXR0 403 aaKnown RBP8.1□□□□□ -1.11
TDP1-212ENST00000555565 COMMD5Q9GZQ3 224 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 SRD5A3Q9H8P0 318 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 COMMD9Q9P000 198 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 MLXQ9UH92 298 aa8.1□□□□□ -1.11
TDP1-212ENST00000555565 TEX50A0A1B0GTY4 177 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 MARCH11A6NNE9 402 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 PGLYRP1O75594 196 aaPredicted RBP8.09□□□□□ -1.11
TDP1-212ENST00000555565 PMP2P02689 132 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 RLN1P04808 185 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 NAT1P18440 290 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 PTBP1P26599 531 aaKnown RBP eCLIP8.09□□□□□ -1.11
TDP1-212ENST00000555565 GPR183P32249 361 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 WT1-ASQ06250 92 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 TM4SF20Q53R12 229 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 TMEM69Q5SWH9 247 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 ZNF57Q68EA5 555 aaPredicted RBP8.09□□□□□ -1.11
TDP1-212ENST00000555565 DMBX1Q8NFW5 382 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 BORCS5Q969J3 196 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 MOB3AQ96BX8 217 aa8.09□□□□□ -1.11
TDP1-212ENST00000555565 ZNF2Q9BSG1 426 aaPredicted RBP8.09□□□□□ -1.11
TDP1-212ENST00000555565 IGHV3-35A0A0C4DH35 117 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 SCAF4O95104 1147 aaKnown RBP8.08□□□□□ -1.12
TDP1-212ENST00000555565 SERPINE2P07093 398 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 TRAPPC2P0DI81 140 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 TRAPPC2BP0DI82 140 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 C8orf88P0DMB2 117 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 OR13C7P0DN81 318 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 F2RP25116 425 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 TAS2R46P59540 309 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 ZNF585BQ52M93 769 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 BTNL8Q6UX41 500 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 SLC16A13Q7RTY0 426 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 LYSMD2Q8IV50 215 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 GDPD1Q8N9F7 314 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 OR5H2Q8NGV7 314 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 FCAMRQ8WWV6 532 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 THYN1Q9P016 225 aa8.08□□□□□ -1.12
TDP1-212ENST00000555565 FAT2Q9NYQ8 4349 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 A0A087WXM4 84 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 KRASP01116 189 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 EIF4EP06730 217 aaKnown RBP8.07□□□□□ -1.12
TDP1-212ENST00000555565 PRSS3P35030 304 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 HRH1P35367 487 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 LPAR6P43657 344 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 MFAP2P55001 183 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 ERVK-16P61578 105 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 THOC7Q6I9Y2 204 aaKnown RBP8.07□□□□□ -1.12
TDP1-212ENST00000555565 PLET1Q6UQ28 207 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 HSD17B13Q7Z5P4 300 aaPredicted RBP8.07□□□□□ -1.12
TDP1-212ENST00000555565 CADM3Q8N126 398 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 TSPAN14Q8NG11 270 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 OR6F1Q8NGZ6 308 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 VN1R17PQ8TDU5 208 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 MARC2Q969Z3 335 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 SLC25A46Q96AG3 418 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 DGCR14Q96DF8 476 aaKnown RBP8.07□□□□□ -1.12
TDP1-212ENST00000555565 ZNF436Q9C0F3 470 aaPredicted RBP8.07□□□□□ -1.12
TDP1-212ENST00000555565 NDUFA4L2Q9NRX3 87 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 NSG2Q9Y328 171 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 PKHD1P08F94 4074 aa8.07□□□□□ -1.12
TDP1-212ENST00000555565 DNAH2Q9P225 4427 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 F8W735 103 aaPredicted RBP8.06□□□□□ -1.12
TDP1-212ENST00000555565 GPR31O00270 319 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 TGOLN2O43493 480 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 DEDDO75618 318 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 TNFAIP8O95379 198 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 HLA-DMAP28067 261 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 G6PCP35575 357 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 ELLP55199 621 aaPredicted RBP8.06□□□□□ -1.12
TDP1-212ENST00000555565 SLC25A24Q6NUK1 477 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 CMTM1Q8IZ96 169 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 OR52B4Q8NGK2 314 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 GPX8Q8TED1 209 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 LSM10Q969L4 123 aaKnown RBP8.06□□□□□ -1.12
TDP1-212ENST00000555565 HINT2Q9BX68 163 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 VCX3AQ9NNX9 186 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 MRPL27Q9P0M9 148 aaKnown RBP8.06□□□□□ -1.12
TDP1-212ENST00000555565 UFC1Q9Y3C8 167 aa8.06□□□□□ -1.12
TDP1-212ENST00000555565 F11RQ9Y624 299 aaKnown RBP8.06□□□□□ -1.12
TDP1-212ENST00000555565 IGHV3-21A0A0B4J1V1 117 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 TRAV25A0A0B4J276 109 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 OR2T8A6NH00 312 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 DBX1A6NMT0 343 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 K7EIM0 57 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 CYB5BO43169 146 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 SNAPC5O75971 98 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 NCS1P62166 190 aa8.05□□□□□ -1.12
TDP1-212ENST00000555565 EWSR1Q01844 656 aaKnown RBP eCLIP8.05□□□□□ -1.12
TDP1-212ENST00000555565 ANKRD55Q3KP44 614 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms