RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZP3P21754 424 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 PTBP1P26599 531 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNX6-203ENST00000555416 INSL3P51460 131 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 MFAP2P55001 183 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 SSBP1Q04837 148 aaKnown RBP10.44□□□□□ -0.74
SNX6-203ENST00000555416 SP6Q3SY56 376 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 ZNF429Q86V71 674 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 QTRT1Q9BXR0 403 aaKnown RBP10.44□□□□□ -0.74
SNX6-203ENST00000555416 NDUFA4L2Q9NRX3 87 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 V9GYH0 126 aa10.44□□□□□ -0.74
SNX6-203ENST00000555416 ANKRD20A5PA0PJZ0 165 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 FABP12A6NFH5 140 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 IGKV1-5P01602 117 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 FGF2P09038 288 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 OR13C7P0DN81 318 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 CADM3Q8N126 398 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 OR1L8Q8NGR8 309 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 RTBDNQ9BSG5 229 aaPredicted RBP10.43□□□□□ -0.74
SNX6-203ENST00000555416 HINT2Q9BX68 163 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 FAM212BQ9NTI7 297 aaPredicted RBP10.43□□□□□ -0.74
SNX6-203ENST00000555416 TMEM14BQ9NUH8 114 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 RSL24D1Q9UHA3 163 aaKnown RBP10.43□□□□□ -0.74
SNX6-203ENST00000555416 ZNF256Q9Y2P7 627 aaPredicted RBP10.43□□□□□ -0.74
SNX6-203ENST00000555416 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
SNX6-203ENST00000555416 OR51B2Q9Y5P1 312 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 SORL1Q92673 2214 aa10.43□□□□□ -0.74
SNX6-203ENST00000555416 H0Y980 276 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 P0C879 139 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 AKAIN1P0CW23 69 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 TRAPPC2P0DI81 140 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 TRAPPC2BP0DI82 140 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 EDN2P20800 178 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 S100GP29377 79 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 ZNF79Q15937 498 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 RPEL1Q2QD12 228 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 CLEC19AQ6UXS0 136 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 ADAMTSL5Q6ZMM2 481 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 OR51S1Q8NGJ8 323 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 OR9G4Q8NGQ1 327 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 ZNF486Q96H40 463 aaPredicted RBP10.42□□□□□ -0.74
SNX6-203ENST00000555416 C5orf66Q9H5L9 145 aa10.42□□□□□ -0.74
SNX6-203ENST00000555416 A0A0G2JRQ6 117 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 C3orf85A0A1B0GTC6 90 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 C15orf61A6NNL5 157 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 SNAPC5O75971 98 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 OR2C1O95371 312 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 LY86O95711 162 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 SERPINE2P07093 398 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 CTSDP07339 412 aaPredicted RBP10.41□□□□□ -0.74
SNX6-203ENST00000555416 CSN3P07498 182 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 DEFA4P12838 97 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 MEF2DQ14814 521 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 H2BFWTQ7Z2G1 175 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 GDPD1Q8N9F7 314 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 ZFAND1Q8TCF1 268 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 TRIM63Q969Q1 353 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 OR4C12Q96R67 309 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 SRSF8Q9BRL6 282 aaKnown RBP10.41□□□□□ -0.74
SNX6-203ENST00000555416 ZC4H2Q9NQZ6 224 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 PRNDQ9UKY0 176 aa10.41□□□□□ -0.74
SNX6-203ENST00000555416 A0A0B4J293 547 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 DISC1C4P0D8 188 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 HIST1H1BP16401 226 aaKnown RBP10.4□□□□□ -0.74
SNX6-203ENST00000555416 SPINK9Q5DT21 86 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 LHFPL5Q8TAF8 219 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 THAP7Q9BT49 309 aaPredicted RBP10.4□□□□□ -0.74
SNX6-203ENST00000555416 ELOVL1Q9BW60 279 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 COPZ2Q9P299 210 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 RABL2AQ9UBK7 228 aaPredicted RBP10.4□□□□□ -0.74
SNX6-203ENST00000555416 ZMAT5Q9UDW3 170 aaKnown RBP10.4□□□□□ -0.74
SNX6-203ENST00000555416 RABL2BQ9UNT1 228 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 GPR132Q9UNW8 380 aa10.4□□□□□ -0.74
SNX6-203ENST00000555416 IGHV3-21A0A0B4J1V1 117 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 IZUMO1RA6ND01 250 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 ZNF701M0R085 212 aaPredicted RBP10.39□□□□□ -0.75
SNX6-203ENST00000555416 DHFRP00374 187 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 OR5AC1P0C628 307 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 GP9P14770 177 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 UCP1P25874 307 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 KLF9Q13886 244 aaPredicted RBP10.39□□□□□ -0.75
SNX6-203ENST00000555416 PYDC2Q56P42 97 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 C11orf87Q6NUJ2 197 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 OR5B3Q8NH48 314 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 ZNF502Q8TBZ5 544 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 GLYATL2Q8WU03 294 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 LSM10Q969L4 123 aaKnown RBP10.39□□□□□ -0.75
SNX6-203ENST00000555416 TMEM230Q96A57 120 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 PRR13Q9NZ81 148 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 F11RQ9Y624 299 aaKnown RBP10.39□□□□□ -0.75
SNX6-203ENST00000555416 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
SNX6-203ENST00000555416 GGCTO75223 188 aaKnown RBP10.38□□□□□ -0.75
SNX6-203ENST00000555416 CLEC3BP05452 202 aa10.38□□□□□ -0.75
SNX6-203ENST00000555416 ARL3P36405 182 aa10.38□□□□□ -0.75
SNX6-203ENST00000555416 MECP2P51608 486 aaKnown RBP10.38□□□□□ -0.75
SNX6-203ENST00000555416 THOC7Q6I9Y2 204 aaKnown RBP10.38□□□□□ -0.75
SNX6-203ENST00000555416 SLC25A24Q6NUK1 477 aa10.38□□□□□ -0.75
SNX6-203ENST00000555416 Q6ZRM9 215 aa10.38□□□□□ -0.75
SNX6-203ENST00000555416 CCDC71LQ8N9Z2 235 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms