RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SCGB3A2Q96PL1 93 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 SRSF8Q9BRL6 282 aaKnown RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 AKIP1Q9NQ31 210 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 PEF1Q9UBV8 284 aaKnown RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 OR51B2Q9Y5P1 312 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 SORL1Q92673 2214 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 C3orf85A0A1B0GTC6 90 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 SAP30O75446 220 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 OR2J3O76001 311 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 MYOD1P15172 320 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 INSL3P51460 131 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 RPEL1Q2QD12 228 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 C15orf32Q32M92 178 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 CADM3Q8N126 398 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 TOMM5Q8N4H5 51 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 MRAPQ8TCY5 172 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 LSM10Q969L4 123 aaKnown RBP9.34□□□□□ -0.91
SRP54-206ENST00000555317 MRGPRFQ96AM1 343 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 SOSTQ9BQB4 213 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 ELOVL1Q9BW60 279 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 AURKAIP1Q9NWT8 199 aaPredicted RBP9.34□□□□□ -0.91
SRP54-206ENST00000555317 FBXL7Q9UJT9 491 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 NSG2Q9Y328 171 aa9.34□□□□□ -0.91
SRP54-206ENST00000555317 TRBV9A0A0B4J1U6 114 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 C15orf61A6NNL5 157 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 E7EUB6 86 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 ZNF45Q02386 682 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 TATDN3Q17R31 274 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 ZNF343Q6P1L6 599 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 ZNF429Q86V71 674 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 DLX4Q92988 240 aaPredicted RBP9.33□□□□□ -0.92
SRP54-206ENST00000555317 RRNAD1Q96FB5 475 aaKnown RBP9.33□□□□□ -0.92
SRP54-206ENST00000555317 SEC22AQ96IW7 307 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 TMEM56Q96MV1 263 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 THYN1Q9P016 225 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 V9GYH0 126 aa9.33□□□□□ -0.92
SRP54-206ENST00000555317 TEX50A0A1B0GTY4 177 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 A0A1B0GW64 132 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 IGLC7A0M8Q6 106 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 CRYGCP07315 174 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 OR13C7P0DN81 318 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 CTRB1P17538 263 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 EGFEM1PQ0D2K5 195 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 TRIQKQ629K1 86 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 ZNF57Q68EA5 555 aaPredicted RBP9.32□□□□□ -0.92
SRP54-206ENST00000555317 CTRB2Q6GPI1 263 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 C19orf35Q6ZS72 473 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 CCDC190Q86UF4 302 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 GDPD1Q8N9F7 314 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 EEF1AKMT3Q96AZ1 226 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 OR4C12Q96R67 309 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 PDCD10Q9BUL8 212 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 NAA60Q9H7X0 242 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 TMEM14BQ9NUH8 114 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 SLC2A8Q9NY64 477 aa9.32□□□□□ -0.92
SRP54-206ENST00000555317 PRKDCP78527 4128 aaKnown RBP9.32□□□□□ -0.92
SRP54-206ENST00000555317 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
SRP54-206ENST00000555317 LY86O95711 162 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 IGKV1-39P01597 117 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 IGKV1D-39P04432 117 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 DHODHQ02127 395 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 DCTN2Q13561 401 aaKnown RBP9.31□□□□□ -0.92
SRP54-206ENST00000555317 SP6Q3SY56 376 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 SGPP2Q8IWX5 399 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 OR10W1Q8NGF6 305 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 OR6Q1Q8NGQ2 317 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 DEDD2Q8WXF8 326 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 TRIM63Q969Q1 353 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 CXorf58Q96LI9 332 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 C5orf66Q9H5L9 145 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 NDUFA4L2Q9NRX3 87 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 KCNIP3Q9Y2W7 256 aa9.31□□□□□ -0.92
SRP54-206ENST00000555317 CGB1A6NKQ9 187 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 TRBV12-3P01733 135 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 OR5AC1P0C628 307 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 ANXA3P12429 323 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 UCP1P25874 307 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 ETV6P41212 452 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 SYNJ2BPP57105 145 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
SRP54-206ENST00000555317 ZNF79Q15937 498 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 SLC25A24Q6NUK1 477 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 ACSM6Q6P461 480 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 SLC35G3Q8N808 338 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 OR1L6Q8NGR2 347 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 RTBDNQ9BSG5 229 aaPredicted RBP9.3□□□□□ -0.92
SRP54-206ENST00000555317 TMEM222Q9H0R3 208 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 PLEKHA3Q9HB20 300 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 ENY2Q9NPA8 101 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 PEMTQ9UBM1 199 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 GPR132Q9UNW8 380 aa9.3□□□□□ -0.92
SRP54-206ENST00000555317 IGLV11-55A0A075B6I3 123 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 TRBV7-1A0A0A6YYK4 115 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 CRYM-AS1A6NIL9 109 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 NDUFB8O95169 186 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 IFNA17P01571 189 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 IGKV1-5P01602 117 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms