RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
MTHFD1-210ENST00000555252 TMEM167BQ9NRX6 74 aa8.85□□□□□ -0.99
MTHFD1-210ENST00000555252 LSM4Q9Y4Z0 139 aaKnown RBP8.85□□□□□ -0.99
MTHFD1-210ENST00000555252 YTHDF2Q9Y5A9 579 aaKnown RBP8.85□□□□□ -0.99
MTHFD1-210ENST00000555252 CACNA1HO95180 2353 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 FREM1Q5H8C1 2179 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 TRGV8A0A0C4DH27 118 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 SLC17A3O00476 420 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 DEFA4P12838 97 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 THBS3P49746 956 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 RAB31Q13636 194 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 GCSAMLQ5JQS6 135 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 TRAT1Q6PIZ9 186 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 TMPRSS7Q7RTY8 843 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 PIP4P1Q86T03 277 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 GCNT2Q8N0V5 402 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 OR8I2Q8N0Y5 310 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 ST6GALNAC3Q8NDV1 305 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 WIPF2Q8TF74 440 aaPredicted RBP8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 TET2Q6N021 2002 aaPredicted RBP8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 IGHV2OR16-5A0A0B4J2B6 119 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 IGHV2-70DA0A0C4DH43 119 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 PRR33A8MZF0 331 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 C12orf77C9JDV5 145 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 F2Z2F3 143 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 PPBPP02775 128 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 SPINK2P20155 84 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 MPV17P39210 176 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 GNG4P50150 75 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 ZNF83P51522 516 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 CCL11P51671 97 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 ALKBH6Q3KRA9 238 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 STUMQ69YW2 141 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 VASH2Q86V25 355 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 NIT1Q86X76 327 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 RNASE8Q8TDE3 154 aaKnown RBP8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 FAM103A1Q9BTL3 118 aaKnown RBP8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 IL19Q9UHD0 177 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 RNF114Q9Y508 228 aa8.84□□□□□ -0.99
MTHFD1-210ENST00000555252 TRAV30A0A087WSZ9 112 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 SMIM27A0A1W2PRY6 76 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 PLA2G5P39877 138 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 VDAC2P45880 294 aaPredicted RBP8.83□□□□□ -1
MTHFD1-210ENST00000555252 SELENOVP59797 346 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 FAM162BQ5T6X4 162 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 ACP7Q6ZNF0 438 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 C11orf53Q8IXP5 236 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 CNEP1R1Q8N9A8 125 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 COMMD5Q9GZQ3 224 aa8.83□□□□□ -1
MTHFD1-210ENST00000555252 TRAV9-2A0A087WT02 112 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 AHRRA9YTQ3 701 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 RRHO14718 337 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 TIMM8AO60220 97 aaPredicted RBP8.82□□□□□ -1
MTHFD1-210ENST00000555252 HBZP02008 142 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 TNFSF4P23510 183 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 KIR2DL2P43627 348 aaPredicted RBP8.82□□□□□ -1
MTHFD1-210ENST00000555252 EFNB3Q15768 340 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 SMIM21Q3B7S5 101 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 TIGITQ495A1 244 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 MIC13Q5XKP0 118 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 FAM169BQ8N8A8 192 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 SLC24A4Q8NFF2 622 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 ALKBH7Q9BT30 221 aaPredicted RBP8.82□□□□□ -1
MTHFD1-210ENST00000555252 MS4A5Q9H3V2 200 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 PLSCR4Q9NRQ2 329 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 IZUMO1RA6ND01 250 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 HELTA6NFD8 242 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 C3orf80F5H4A9 247 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 BMPR1BO00238 502 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 NKX2-8O15522 239 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 PSPNO60542 156 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 CA2P00918 260 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 ADH4P08319 380 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 LINC00869P0C866 280 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 KIR2DS2P43631 304 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 MBNL2Q5VZF2 373 aaKnown RBP8.82□□□□□ -1
MTHFD1-210ENST00000555252 TEPPQ6URK8 271 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 ZNF808Q8N4W9 903 aaPredicted RBP8.82□□□□□ -1
MTHFD1-210ENST00000555252 ZNF439Q8NDP4 499 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 FDCSPQ8NFU4 85 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 OR4A16Q8NH70 328 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 TSKUQ8WUA8 353 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 C19orf24Q9BVV8 132 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 C1RLQ9NZP8 487 aa8.82□□□□□ -1
MTHFD1-210ENST00000555252 CNTRLQ7Z7A1 2325 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 IGLC7A0M8Q6 106 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 GFRA3O60609 400 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 IGLV1-44P01699 117 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 OR9G9P0C7N8 305 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 PMCHP20382 165 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 HNF1AP20823 631 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 SRIP30626 198 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 KLF5Q13887 457 aaPredicted RBP8.81□□□□□ -1
MTHFD1-210ENST00000555252 FBLN7Q53RD9 439 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 CENPWQ5EE01 88 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 WDR82Q6UXN9 313 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 MUC15Q8N387 334 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 C9orf106Q8NAJ2 232 aa8.81□□□□□ -1
MTHFD1-210ENST00000555252 HEYLQ9NQ87 328 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms