RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SLC25A33Q9BSK2 321 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 KIAA1456Q9P272 454 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 TNFSF18Q9UNG2 199 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 IGSF23A1L1A6 192 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 REG1AP05451 166 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 HNF1AP20823 631 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 HOXA1P49639 335 aaPredicted RBP8.53□□□□□ -1.04
TDP1-211ENST00000555178 CAV2P51636 162 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 HSPE1P61604 102 aaKnown RBP8.53□□□□□ -1.04
TDP1-211ENST00000555178 TMEM267Q0VDI3 215 aaPredicted RBP8.53□□□□□ -1.04
TDP1-211ENST00000555178 OR4A5Q8NH83 315 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 RBM14Q96PK6 669 aaKnown RBP8.53□□□□□ -1.04
TDP1-211ENST00000555178 COMMD5Q9GZQ3 224 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 FBXO7Q9Y3I1 522 aa8.53□□□□□ -1.04
TDP1-211ENST00000555178 TENM1Q9UKZ4 2725 aa8.52□□□□□ -1.04
TDP1-211ENST00000555178 FAM90A26D6RGX4 464 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 PET100P0DJ07 73 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 HKR1P10072 659 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 VDAC2P45880 294 aaPredicted RBP8.52□□□□□ -1.05
TDP1-211ENST00000555178 SPCS3P61009 180 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 PRCDQ00LT1 54 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 MMD2Q8IY49 270 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 TMEM170AQ8WVE7 144 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 PPP1R14BQ96C90 147 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 OR4C12Q96R67 309 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 NDUFA4L2Q9NRX3 87 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 HSPB11Q9Y547 144 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 FBN1P35555 2871 aaKnown RBP8.52□□□□□ -1.05
TDP1-211ENST00000555178 E5RGE8 158 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 RLN2P04090 185 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 COMPP49747 757 aaPredicted RBP8.52□□□□□ -1.05
TDP1-211ENST00000555178 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 TMEM95Q3KNT9 176 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 PDLIM3Q53GG5 364 aaPredicted RBP8.52□□□□□ -1.05
TDP1-211ENST00000555178 SPANXN5Q5MJ07 72 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 C5orf56Q8N8D9 126 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 OR52E5Q8NH55 327 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 MFFQ9GZY8 342 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 PSENENQ9NZ42 101 aa8.52□□□□□ -1.05
TDP1-211ENST00000555178 PAIP2BQ9ULR5 123 aaKnown RBP8.52□□□□□ -1.05
TDP1-211ENST00000555178 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 L7N2F9 121 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 CST7O76096 145 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 AREGP15514 252 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 VAMP2P63027 116 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 CX3CL1P78423 397 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 NHLH2Q02577 135 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 OR2C3Q8N628 320 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 OR5B3Q8NH48 314 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 SRSF12Q8WXF0 261 aaKnown RBP8.51□□□□□ -1.05
TDP1-211ENST00000555178 SMIM3Q9BZL3 60 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 LYRM2Q9NU23 88 aaPredicted RBP8.51□□□□□ -1.05
TDP1-211ENST00000555178 LINC00527Q9UJ94 153 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 ZNF257Q9Y2Q1 563 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 MOB4Q9Y3A3 225 aa8.51□□□□□ -1.05
TDP1-211ENST00000555178 IGHV7-81A0A0B4J1V7 117 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 TEX22C9J3V5 150 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 ACTL6BO94805 426 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 FGF2P09038 288 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 METTL15P1P0C7V9 234 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 RPL12P30050 165 aaKnown RBP8.5□□□□□ -1.05
TDP1-211ENST00000555178 RPL27AP46776 148 aaKnown RBP8.5□□□□□ -1.05
TDP1-211ENST00000555178 AANATQ16613 207 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 HIST2H2BDQ6DRA6 164 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 TMEM65Q6PI78 240 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 HAPLN4Q86UW8 402 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 TMEM217Q8N7C4 229 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 SSMEM1Q8WWF3 244 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 RAB40CQ96S21 281 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 PLEKHA3Q9HB20 300 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 HEYLQ9NQ87 328 aaPredicted RBP8.5□□□□□ -1.05
TDP1-211ENST00000555178 VPREB3Q9UKI3 123 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 IGLC7A0M8Q6 106 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 GPR137BO60478 399 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 CNIH1O95406 144 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 EGR2P11161 476 aaPredicted RBP8.5□□□□□ -1.05
TDP1-211ENST00000555178 PVALBP20472 110 aaPredicted RBP8.5□□□□□ -1.05
TDP1-211ENST00000555178 P2RY1P47900 373 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 EWSR1Q01844 656 aaKnown RBP eCLIP8.5□□□□□ -1.05
TDP1-211ENST00000555178 ARL16Q0P5N6 197 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 FXYD3Q14802 87 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 TMEM252Q8N6L7 170 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 SMIM8Q96KF7 97 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 AQP10Q96PS8 301 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 RASL11BQ9BPW5 248 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 ZFP57Q9NU63 452 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 FKBP11Q9NYL4 201 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 WSB1Q9Y6I7 421 aa8.5□□□□□ -1.05
TDP1-211ENST00000555178 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 MED6O75586 246 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 FAM157CP0CG43 387 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 ACOT7LQ6ZUV0 252 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 INO80EQ8NBZ0 244 aaPredicted RBP8.49□□□□□ -1.05
TDP1-211ENST00000555178 ARL6Q9H0F7 186 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 C1RLQ9NZP8 487 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 ATRQ13535 2644 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 TSC22D2O75157 780 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms